Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
C3orf56Q8N813 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 FLJ13224-201ENST00000313737 1514 ntBASIC12.88□□□□□ -0.35
C3orf56Q8N813 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
C3orf56Q8N813 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 AC092933.1-201ENST00000393644 945 ntBASIC12.87□□□□□ -0.35
C3orf56Q8N813 ACTBP11-201ENST00000436287 1126 ntBASIC12.87□□□□□ -0.35
C3orf56Q8N813 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 ORC6-206ENST00000568364 888 ntTSL 5 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 MPDU1-223ENST00000582151 728 ntBASIC12.87□□□□□ -0.35
C3orf56Q8N813 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
C3orf56Q8N813 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
C3orf56Q8N813 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 AL021920.2-201ENST00000624828 1351 ntBASIC12.86□□□□□ -0.35
C3orf56Q8N813 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C3orf56Q8N813 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 AL080243.2-201ENST00000418783 582 ntBASIC12.86□□□□□ -0.35
C3orf56Q8N813 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 AC098859.1-201ENST00000502915 1238 ntBASIC12.86□□□□□ -0.35
C3orf56Q8N813 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 AC044860.1-202ENST00000559481 777 ntBASIC12.86□□□□□ -0.35
C3orf56Q8N813 QPRT-203ENST00000562473 579 ntTSL 3 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.86□□□□□ -0.35
C3orf56Q8N813 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms