Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 RBM17P3-201ENST00000417687 1192 ntBASIC14.95□□□□□ -0.02
SHFQ7M4L6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 AC106795.1-205ENST00000512851 1056 ntBASIC14.95□□□□□ -0.02
SHFQ7M4L6 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 AL139288.1-201ENST00000623748 933 ntBASIC14.95□□□□□ -0.02
SHFQ7M4L6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
SHFQ7M4L6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
SHFQ7M4L6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 BX005266.1-201ENST00000473402 457 ntBASIC14.94□□□□□ -0.02
SHFQ7M4L6 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 AC138894.3-201ENST00000603787 634 ntBASIC14.94□□□□□ -0.02
SHFQ7M4L6 AP001269.4-201ENST00000609611 512 ntBASIC14.94□□□□□ -0.02
SHFQ7M4L6 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SHFQ7M4L6 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHFQ7M4L6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.93□□□□□ -0.02
SHFQ7M4L6 AL589182.2-201ENST00000619332 1049 ntBASIC14.93□□□□□ -0.02
SHFQ7M4L6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHFQ7M4L6 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.93□□□□□ -0.02
SHFQ7M4L6 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms