Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 GPR89P-201ENST00000407924 1495 ntBASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP4Q6PIL6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 TSPY17P-201ENST00000450329 467 ntBASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 AC128688.1-201ENST00000487626 519 ntBASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 AC113404.2-201ENST00000507884 177 ntBASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 REXO1L10P-201ENST00000615707 1290 ntBASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 REXO1L12P-201ENST00000622156 912 ntBASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.81□□□□□ -0.36
KCNIP4Q6PIL6 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms