Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.23■□□□□ 0.03
SMIM11AP58511 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.23■□□□□ 0.03
SMIM11AP58511 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.23■□□□□ 0.03
SMIM11AP58511 PMS2P1-201ENST00000431037 1228 ntBASIC15.23■□□□□ 0.03
SMIM11AP58511 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.23■□□□□ 0.03
SMIM11AP58511 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM11AP58511 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.23■□□□□ 0.03
SMIM11AP58511 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.23■□□□□ 0.03
SMIM11AP58511 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.23■□□□□ 0.03
SMIM11AP58511 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SMIM11AP58511 MTDHP3-201ENST00000594186 672 ntBASIC15.23■□□□□ 0.03
SMIM11AP58511 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.23■□□□□ 0.03
SMIM11AP58511 AL805961.1-202ENST00000641562 540 ntBASIC15.23■□□□□ 0.03
SMIM11AP58511 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.23■□□□□ 0.03
SMIM11AP58511 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.23■□□□□ 0.03
SMIM11AP58511 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.23■□□□□ 0.03
SMIM11AP58511 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 AC010491.1-201ENST00000563101 2797 ntBASIC15.23■□□□□ 0.03
SMIM11AP58511 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMIM11AP58511 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
SMIM11AP58511 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.22■□□□□ 0.03
SMIM11AP58511 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SMIM11AP58511 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.22■□□□□ 0.03
SMIM11AP58511 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SMIM11AP58511 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.22■□□□□ 0.03
SMIM11AP58511 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.22■□□□□ 0.03
SMIM11AP58511 KRT18P21-201ENST00000515767 1272 ntBASIC15.22■□□□□ 0.03
SMIM11AP58511 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.22■□□□□ 0.03
SMIM11AP58511 AC092119.3-201ENST00000612618 583 ntBASIC15.22■□□□□ 0.03
SMIM11AP58511 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.22■□□□□ 0.03
SMIM11AP58511 GGTLC5P-201ENST00000617623 998 ntBASIC15.22■□□□□ 0.03
SMIM11AP58511 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 CDC14C-201ENST00000428251 1719 ntBASIC15.22■□□□□ 0.03
SMIM11AP58511 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
SMIM11AP58511 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.22■□□□□ 0.03
SMIM11AP58511 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 SLC22A20-204ENST00000530038 1673 ntBASIC15.22■□□□□ 0.03
SMIM11AP58511 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
SMIM11AP58511 AC104640.1-201ENST00000562617 2109 ntBASIC15.22■□□□□ 0.03
SMIM11AP58511 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMIM11AP58511 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.22■□□□□ 0.03
SMIM11AP58511 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.21■□□□□ 0.03
SMIM11AP58511 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.21■□□□□ 0.03
SMIM11AP58511 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.21■□□□□ 0.03
SMIM11AP58511 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.21■□□□□ 0.03
SMIM11AP58511 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.21■□□□□ 0.03
SMIM11AP58511 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
SMIM11AP58511 SCARNA2-201ENST00000458748 420 ntBASIC15.21■□□□□ 0.03
SMIM11AP58511 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
SMIM11AP58511 LINC02447-202ENST00000501888 2146 ntBASIC15.21■□□□□ 0.03
SMIM11AP58511 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.21■□□□□ 0.03
SMIM11AP58511 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.21■□□□□ 0.03
SMIM11AP58511 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
SMIM11AP58511 MTDHP4-201ENST00000600287 670 ntBASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms