Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ATP1B3P54709 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.35□□□□□ -0.11
ATP1B3P54709 NORAD-201ENST00000565493 5339 ntBASIC14.35□□□□□ -0.11
ATP1B3P54709 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.35□□□□□ -0.11
ATP1B3P54709 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 KRT8P39-201ENST00000396270 1433 ntBASIC14.35□□□□□ -0.11
ATP1B3P54709 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.35□□□□□ -0.11
ATP1B3P54709 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.35□□□□□ -0.11
ATP1B3P54709 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.35□□□□□ -0.11
ATP1B3P54709 AC021087.4-201ENST00000563761 564 ntBASIC14.35□□□□□ -0.11
ATP1B3P54709 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.35□□□□□ -0.11
ATP1B3P54709 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.35□□□□□ -0.11
ATP1B3P54709 AP001350.2-201ENST00000625104 1094 ntBASIC14.35□□□□□ -0.11
ATP1B3P54709 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
ATP1B3P54709 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ATP1B3P54709 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.35□□□□□ -0.11
ATP1B3P54709 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.35□□□□□ -0.11
ATP1B3P54709 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.35□□□□□ -0.11
ATP1B3P54709 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 AC131009.4-201ENST00000624048 1740 ntBASIC14.35□□□□□ -0.11
ATP1B3P54709 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.35□□□□□ -0.11
ATP1B3P54709 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
ATP1B3P54709 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ATP1B3P54709 AC006504.4-201ENST00000592118 1568 ntBASIC14.34□□□□□ -0.11
ATP1B3P54709 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ATP1B3P54709 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ATP1B3P54709 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.34□□□□□ -0.11
ATP1B3P54709 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.34□□□□□ -0.11
ATP1B3P54709 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.34□□□□□ -0.11
ATP1B3P54709 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.34□□□□□ -0.11
ATP1B3P54709 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.34□□□□□ -0.11
ATP1B3P54709 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.34□□□□□ -0.11
ATP1B3P54709 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ATP1B3P54709 MIR4492-201ENST00000581627 80 ntBASIC14.34□□□□□ -0.11
ATP1B3P54709 AC025062.2-201ENST00000605477 670 ntBASIC14.34□□□□□ -0.11
ATP1B3P54709 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 REXO1L3P-201ENST00000622202 1288 ntBASIC14.34□□□□□ -0.11
ATP1B3P54709 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.34□□□□□ -0.11
ATP1B3P54709 AC107918.4-202ENST00000641623 219 ntBASIC14.34□□□□□ -0.11
ATP1B3P54709 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.34□□□□□ -0.11
ATP1B3P54709 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.34□□□□□ -0.11
ATP1B3P54709 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ATP1B3P54709 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
ATP1B3P54709 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ATP1B3P54709 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ATP1B3P54709 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ATP1B3P54709 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ATP1B3P54709 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATP1B3P54709 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.33□□□□□ -0.11
ATP1B3P54709 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATP1B3P54709 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATP1B3P54709 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
ATP1B3P54709 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATP1B3P54709 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ATP1B3P54709 GGT3P-204ENST00000453783 1664 ntBASIC14.33□□□□□ -0.11
ATP1B3P54709 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.33□□□□□ -0.11
ATP1B3P54709 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATP1B3P54709 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms