Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN3P51790 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN3P51790 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN3P51790 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CLCN3P51790 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN3P51790 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN3P51790 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCN3P51790 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CLCN3P51790 AC024267.1-201ENST00000582320 895 ntBASIC18.01■□□□□ 0.47
CLCN3P51790 AC008761.3-201ENST00000624803 892 ntBASIC18.01■□□□□ 0.47
CLCN3P51790 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.01■□□□□ 0.47
CLCN3P51790 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN3P51790 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCN3P51790 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN3P51790 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CLCN3P51790 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CLCN3P51790 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN3P51790 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
CLCN3P51790 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
CLCN3P51790 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCN3P51790 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CLCN3P51790 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.01■□□□□ 0.47
CLCN3P51790 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.01■□□□□ 0.47
CLCN3P51790 LINC01144-201ENST00000626198 1710 ntBASIC18.01■□□□□ 0.47
CLCN3P51790 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18■□□□□ 0.47
CLCN3P51790 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 AC022144.1-201ENST00000602255 1580 ntBASIC18■□□□□ 0.47
CLCN3P51790 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC18■□□□□ 0.47
CLCN3P51790 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CLCN3P51790 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CLCN3P51790 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18■□□□□ 0.47
CLCN3P51790 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18■□□□□ 0.47
CLCN3P51790 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18■□□□□ 0.47
CLCN3P51790 AL080243.2-201ENST00000418783 582 ntBASIC18■□□□□ 0.47
CLCN3P51790 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 FAM207CP-201ENST00000443486 507 ntBASIC18■□□□□ 0.47
CLCN3P51790 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18■□□□□ 0.47
CLCN3P51790 SERBP1P5-201ENST00000510079 1181 ntBASIC18■□□□□ 0.47
CLCN3P51790 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18■□□□□ 0.47
CLCN3P51790 AL079307.3-201ENST00000556114 283 ntBASIC18■□□□□ 0.47
CLCN3P51790 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18■□□□□ 0.47
CLCN3P51790 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18■□□□□ 0.47
CLCN3P51790 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC18■□□□□ 0.47
CLCN3P51790 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18■□□□□ 0.47
CLCN3P51790 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLCN3P51790 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CLCN3P51790 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18■□□□□ 0.47
CLCN3P51790 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CLCN3P51790 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.99■□□□□ 0.47
CLCN3P51790 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 FLJ38576-201ENST00000623820 2459 ntBASIC17.99■□□□□ 0.47
CLCN3P51790 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 AC011676.5-201ENST00000624864 2660 ntBASIC17.99■□□□□ 0.47
CLCN3P51790 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLCN3P51790 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLCN3P51790 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCN3P51790 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.99■□□□□ 0.47
CLCN3P51790 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.99■□□□□ 0.47
CLCN3P51790 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CLCN3P51790 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CLCN3P51790 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms