Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1EP49674 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1EP49674 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CSNK1EP49674 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CSNK1EP49674 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1EP49674 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CSNK1EP49674 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1EP49674 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1EP49674 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CSNK1EP49674 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CSNK1EP49674 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1EP49674 SDHAP3-202ENST00000515467 728 ntBASIC16.05■□□□□ 0.16
CSNK1EP49674 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1EP49674 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1EP49674 AP002490.2-201ENST00000524791 560 ntBASIC16.05■□□□□ 0.16
CSNK1EP49674 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.05■□□□□ 0.16
CSNK1EP49674 TPRX2P-201ENST00000535362 881 ntBASIC16.05■□□□□ 0.16
CSNK1EP49674 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.05■□□□□ 0.16
CSNK1EP49674 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.05■□□□□ 0.16
CSNK1EP49674 AC141586.5-201ENST00000624546 2050 ntBASIC16.05■□□□□ 0.16
CSNK1EP49674 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1EP49674 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1EP49674 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1EP49674 GPAA1P2-202ENST00000606848 1787 ntBASIC16.05■□□□□ 0.16
CSNK1EP49674 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CSNK1EP49674 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CSNK1EP49674 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.05■□□□□ 0.16
CSNK1EP49674 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1EP49674 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.05■□□□□ 0.16
CSNK1EP49674 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1EP49674 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.04■□□□□ 0.16
CSNK1EP49674 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1EP49674 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
CSNK1EP49674 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.04■□□□□ 0.16
CSNK1EP49674 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CSNK1EP49674 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.04■□□□□ 0.16
CSNK1EP49674 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1EP49674 SPDYE17-201ENST00000412399 783 ntBASIC16.04■□□□□ 0.16
CSNK1EP49674 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.04■□□□□ 0.16
CSNK1EP49674 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.04■□□□□ 0.16
CSNK1EP49674 AC017083.2-201ENST00000608069 979 ntBASIC16.04■□□□□ 0.16
CSNK1EP49674 AL109936.8-201ENST00000641772 604 ntBASIC16.04■□□□□ 0.16
CSNK1EP49674 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CSNK1EP49674 AC106820.2-201ENST00000563775 3264 ntBASIC16.04■□□□□ 0.16
CSNK1EP49674 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1EP49674 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 AL031731.1-201ENST00000642131 2094 ntBASIC16.04■□□□□ 0.16
CSNK1EP49674 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CSNK1EP49674 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CSNK1EP49674 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1EP49674 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
CSNK1EP49674 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.04■□□□□ 0.16
CSNK1EP49674 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CSNK1EP49674 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1EP49674 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1EP49674 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1EP49674 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CSNK1EP49674 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.03■□□□□ 0.16
CSNK1EP49674 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.03■□□□□ 0.16
CSNK1EP49674 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.03■□□□□ 0.16
CSNK1EP49674 AL162274.1-201ENST00000617191 1098 ntBASIC16.03■□□□□ 0.16
CSNK1EP49674 MIR6069-201ENST00000620069 79 ntBASIC16.03■□□□□ 0.16
CSNK1EP49674 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CSNK1EP49674 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CSNK1EP49674 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CSNK1EP49674 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.02■□□□□ 0.16
CSNK1EP49674 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CSNK1EP49674 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CSNK1EP49674 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
CSNK1EP49674 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.02■□□□□ 0.16
CSNK1EP49674 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.02■□□□□ 0.16
CSNK1EP49674 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1EP49674 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1EP49674 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
CSNK1EP49674 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms