Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.17■□□□□ 0.34
MTHFRP42898 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.17■□□□□ 0.34
MTHFRP42898 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
MTHFRP42898 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.17■□□□□ 0.34
MTHFRP42898 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.17■□□□□ 0.34
MTHFRP42898 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
MTHFRP42898 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.17■□□□□ 0.34
MTHFRP42898 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.17■□□□□ 0.34
MTHFRP42898 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.17■□□□□ 0.34
MTHFRP42898 AC114501.2-201ENST00000439631 535 ntBASIC17.17■□□□□ 0.34
MTHFRP42898 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.17■□□□□ 0.34
MTHFRP42898 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.17■□□□□ 0.34
MTHFRP42898 AL512361.1-201ENST00000554200 418 ntBASIC17.17■□□□□ 0.34
MTHFRP42898 AC044860.1-202ENST00000559481 777 ntBASIC17.17■□□□□ 0.34
MTHFRP42898 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
MTHFRP42898 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.17■□□□□ 0.34
MTHFRP42898 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.17■□□□□ 0.34
MTHFRP42898 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.17■□□□□ 0.34
MTHFRP42898 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.17■□□□□ 0.34
MTHFRP42898 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MTHFRP42898 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.17■□□□□ 0.34
MTHFRP42898 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
MTHFRP42898 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.17■□□□□ 0.34
MTHFRP42898 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
MTHFRP42898 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
MTHFRP42898 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
MTHFRP42898 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MTHFRP42898 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.16■□□□□ 0.34
MTHFRP42898 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
MTHFRP42898 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MTHFRP42898 AC141586.5-201ENST00000624546 2050 ntBASIC17.16■□□□□ 0.34
MTHFRP42898 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 AC084018.2-201ENST00000613093 2607 ntBASIC17.16■□□□□ 0.34
MTHFRP42898 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.16■□□□□ 0.34
MTHFRP42898 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.16■□□□□ 0.34
MTHFRP42898 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.16■□□□□ 0.34
MTHFRP42898 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.16■□□□□ 0.34
MTHFRP42898 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC17.16■□□□□ 0.34
MTHFRP42898 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.16■□□□□ 0.34
MTHFRP42898 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.16■□□□□ 0.34
MTHFRP42898 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.16■□□□□ 0.34
MTHFRP42898 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.16■□□□□ 0.34
MTHFRP42898 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.16■□□□□ 0.34
MTHFRP42898 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC17.16■□□□□ 0.34
MTHFRP42898 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 TUBB8P12-201ENST00000308911 1335 ntBASIC17.16■□□□□ 0.34
MTHFRP42898 TUBB7P-202ENST00000428444 1305 ntBASIC17.16■□□□□ 0.34
MTHFRP42898 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 TUBB8P7-204ENST00000567960 1332 ntBASIC17.16■□□□□ 0.34
MTHFRP42898 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
MTHFRP42898 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.16■□□□□ 0.34
MTHFRP42898 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
MTHFRP42898 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.15■□□□□ 0.34
MTHFRP42898 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
MTHFRP42898 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
MTHFRP42898 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
MTHFRP42898 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
MTHFRP42898 TTTY23B-201ENST00000442790 549 ntBASIC17.15■□□□□ 0.34
MTHFRP42898 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
MTHFRP42898 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC17.15■□□□□ 0.34
MTHFRP42898 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.15■□□□□ 0.34
MTHFRP42898 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.15■□□□□ 0.34
MTHFRP42898 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.15■□□□□ 0.34
MTHFRP42898 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.15■□□□□ 0.34
MTHFRP42898 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
MTHFRP42898 AC024267.1-201ENST00000582320 895 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms