Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC28.43■■■□□ 2.14
NCAPD3P42695 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC28.42■■■□□ 2.14
NCAPD3P42695 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
NCAPD3P42695 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
NCAPD3P42695 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NCAPD3P42695 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NCAPD3P42695 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
NCAPD3P42695 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NCAPD3P42695 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC28.42■■■□□ 2.14
NCAPD3P42695 AC092978.1-202ENST00000637590 1327 ntBASIC28.42■■■□□ 2.14
NCAPD3P42695 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
NCAPD3P42695 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC28.42■■■□□ 2.14
NCAPD3P42695 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC28.42■■■□□ 2.14
NCAPD3P42695 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
NCAPD3P42695 KRTAP10-13P-201ENST00000412914 571 ntBASIC28.42■■■□□ 2.14
NCAPD3P42695 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC28.42■■■□□ 2.14
NCAPD3P42695 ELP6-209ENST00000446787 894 ntTSL 3 BASIC28.42■■■□□ 2.14
NCAPD3P42695 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC28.42■■■□□ 2.14
NCAPD3P42695 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
NCAPD3P42695 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
NCAPD3P42695 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC28.42■■■□□ 2.14
NCAPD3P42695 AHCYP2-201ENST00000430630 1300 ntBASIC28.41■■■□□ 2.14
NCAPD3P42695 HNRNPA1P32-201ENST00000396326 963 ntBASIC28.41■■■□□ 2.14
NCAPD3P42695 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC28.41■■■□□ 2.14
NCAPD3P42695 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC28.41■■■□□ 2.14
NCAPD3P42695 IFT20-206ENST00000578122 834 ntTSL 2 BASIC28.41■■■□□ 2.14
NCAPD3P42695 IFT20-208ENST00000578985 831 ntTSL 3 BASIC28.41■■■□□ 2.14
NCAPD3P42695 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC28.41■■■□□ 2.14
NCAPD3P42695 AC097724.1-201ENST00000609581 426 ntBASIC28.41■■■□□ 2.14
NCAPD3P42695 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
NCAPD3P42695 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
NCAPD3P42695 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC28.41■■■□□ 2.14
NCAPD3P42695 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 IGF1-203ENST00000392904 761 ntTSL 5 BASIC28.4■■■□□ 2.14
NCAPD3P42695 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC28.4■■■□□ 2.14
NCAPD3P42695 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC28.4■■■□□ 2.14
NCAPD3P42695 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC28.4■■■□□ 2.14
NCAPD3P42695 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC28.4■■■□□ 2.14
NCAPD3P42695 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC28.4■■■□□ 2.14
NCAPD3P42695 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
NCAPD3P42695 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.14
NCAPD3P42695 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
NCAPD3P42695 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC28.4■■■□□ 2.14
NCAPD3P42695 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC28.4■■■□□ 2.14
NCAPD3P42695 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
NCAPD3P42695 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NCAPD3P42695 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
NCAPD3P42695 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
NCAPD3P42695 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC28.39■■■□□ 2.14
NCAPD3P42695 AC015818.8-201ENST00000587907 1519 ntBASIC28.39■■■□□ 2.13
NCAPD3P42695 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
NCAPD3P42695 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC28.39■■■□□ 2.13
NCAPD3P42695 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC28.39■■■□□ 2.13
NCAPD3P42695 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.13
NCAPD3P42695 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
NCAPD3P42695 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC28.39■■■□□ 2.13
NCAPD3P42695 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
NCAPD3P42695 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.13
NCAPD3P42695 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NCAPD3P42695 PCGF3-213ENST00000620529 1899 ntBASIC28.38■■■□□ 2.13
NCAPD3P42695 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
NCAPD3P42695 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
NCAPD3P42695 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NCAPD3P42695 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC28.38■■■□□ 2.13
NCAPD3P42695 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
NCAPD3P42695 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NCAPD3P42695 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC28.38■■■□□ 2.13
NCAPD3P42695 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC28.38■■■□□ 2.13
NCAPD3P42695 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC28.38■■■□□ 2.13
NCAPD3P42695 PTPA-217ENST00000434095 870 ntTSL 2 BASIC28.38■■■□□ 2.13
NCAPD3P42695 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC28.38■■■□□ 2.13
NCAPD3P42695 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
NCAPD3P42695 AC104982.3-201ENST00000581995 514 ntBASIC28.38■■■□□ 2.13
NCAPD3P42695 MIR5572-201ENST00000583188 137 ntBASIC28.38■■■□□ 2.13
NCAPD3P42695 AC135050.7-201ENST00000624508 2218 ntBASIC28.38■■■□□ 2.13
NCAPD3P42695 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC28.38■■■□□ 2.13
NCAPD3P42695 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC28.38■■■□□ 2.13
NCAPD3P42695 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
NCAPD3P42695 AC008764.6-201ENST00000595909 2069 ntBASIC28.37■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms