Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
CKS2P33552 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
CKS2P33552 PPT1-215ENST00000641471 2368 ntBASIC12.18□□□□□ -0.46
CKS2P33552 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.18□□□□□ -0.46
CKS2P33552 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CKS2P33552 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.18□□□□□ -0.46
CKS2P33552 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CKS2P33552 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.17□□□□□ -0.46
CKS2P33552 LINC02447-202ENST00000501888 2146 ntBASIC12.17□□□□□ -0.46
CKS2P33552 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CKS2P33552 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.17□□□□□ -0.46
CKS2P33552 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.17□□□□□ -0.46
CKS2P33552 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.17□□□□□ -0.46
CKS2P33552 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
CKS2P33552 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
CKS2P33552 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 AC003669.1-201ENST00000334569 611 ntBASIC12.17□□□□□ -0.46
CKS2P33552 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
CKS2P33552 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 FAM220CP-201ENST00000395253 831 ntBASIC12.17□□□□□ -0.46
CKS2P33552 HLA-F-220ENST00000434407 884 ntBASIC12.17□□□□□ -0.46
CKS2P33552 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.17□□□□□ -0.46
CKS2P33552 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.17□□□□□ -0.46
CKS2P33552 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC12.17□□□□□ -0.46
CKS2P33552 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.17□□□□□ -0.46
CKS2P33552 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CKS2P33552 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.17□□□□□ -0.46
CKS2P33552 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CKS2P33552 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.17□□□□□ -0.46
CKS2P33552 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CKS2P33552 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.17□□□□□ -0.46
CKS2P33552 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CKS2P33552 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CKS2P33552 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.16□□□□□ -0.46
CKS2P33552 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.16□□□□□ -0.46
CKS2P33552 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CKS2P33552 AC006277.1-201ENST00000624348 1610 ntBASIC12.16□□□□□ -0.46
CKS2P33552 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
CKS2P33552 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CKS2P33552 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC12.16□□□□□ -0.46
CKS2P33552 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CKS2P33552 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CKS2P33552 AC142381.4-202ENST00000563973 229 ntBASIC12.16□□□□□ -0.46
CKS2P33552 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.16□□□□□ -0.46
CKS2P33552 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms