Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD53P19397 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD53P19397 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CD53P19397 AL353593.2-201ENST00000602529 1483 ntBASIC15.02■□□□□ -0
CD53P19397 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CD53P19397 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD53P19397 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD53P19397 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD53P19397 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD53P19397 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD53P19397 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CD53P19397 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CD53P19397 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.02■□□□□ -0
CD53P19397 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.02■□□□□ -0
CD53P19397 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CD53P19397 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CD53P19397 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD53P19397 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.02■□□□□ -0
CD53P19397 AC073592.5-201ENST00000624854 528 ntBASIC15.02■□□□□ -0
CD53P19397 AL139011.1-202ENST00000642063 584 ntBASIC15.02■□□□□ -0
CD53P19397 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.02□□□□□ -0.01
CD53P19397 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
CD53P19397 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.02□□□□□ -0.01
CD53P19397 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 AC104640.1-201ENST00000562617 2109 ntBASIC15.02□□□□□ -0.01
CD53P19397 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.02□□□□□ -0.01
CD53P19397 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.02□□□□□ -0.01
CD53P19397 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.02□□□□□ -0.01
CD53P19397 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CD53P19397 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
CD53P19397 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CD53P19397 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.02□□□□□ -0.01
CD53P19397 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD53P19397 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.02□□□□□ -0.01
CD53P19397 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CD53P19397 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CD53P19397 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CD53P19397 AC068418.2-201ENST00000577309 3703 ntBASIC15.01□□□□□ -0.01
CD53P19397 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.01□□□□□ -0.01
CD53P19397 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.01□□□□□ -0.01
CD53P19397 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.01□□□□□ -0.01
CD53P19397 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 ELK2BP-201ENST00000415014 1224 ntBASIC15.01□□□□□ -0.01
CD53P19397 CNN2P11-201ENST00000429351 262 ntBASIC15.01□□□□□ -0.01
CD53P19397 HTR5BP-201ENST00000430851 1154 ntBASIC15.01□□□□□ -0.01
CD53P19397 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
CD53P19397 VN2R19P-201ENST00000442399 1052 ntBASIC15.01□□□□□ -0.01
CD53P19397 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.01□□□□□ -0.01
CD53P19397 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.01□□□□□ -0.01
CD53P19397 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CD53P19397 MIR4751-201ENST00000578027 74 ntBASIC15.01□□□□□ -0.01
CD53P19397 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.01□□□□□ -0.01
CD53P19397 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.01□□□□□ -0.01
CD53P19397 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.01□□□□□ -0.01
CD53P19397 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
CD53P19397 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
CD53P19397 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD53P19397 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.01□□□□□ -0.01
CD53P19397 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD53P19397 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD53P19397 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD53P19397 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CD53P19397 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CD53P19397 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD53P19397 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD53P19397 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CD53P19397 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD53P19397 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD53P19397 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CD53P19397 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15□□□□□ -0.01
CD53P19397 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD53P19397 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD53P19397 AC006504.4-201ENST00000592118 1568 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms