Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 CTNS-203ENST00000399306 803 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 TSPY22P-201ENST00000427496 604 ntBASIC14.25□□□□□ -0.13
HLA-DQB1P01920 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 KRT18P57-201ENST00000443599 1254 ntBASIC14.25□□□□□ -0.13
HLA-DQB1P01920 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 SIGLEC30P-201ENST00000455569 941 ntBASIC14.25□□□□□ -0.13
HLA-DQB1P01920 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 AC090616.6-201ENST00000582640 721 ntBASIC14.25□□□□□ -0.13
HLA-DQB1P01920 AL592071.1-201ENST00000611956 408 ntBASIC14.25□□□□□ -0.13
HLA-DQB1P01920 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.25□□□□□ -0.13
HLA-DQB1P01920 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HLA-DQB1P01920 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 LINC01144-201ENST00000626198 1710 ntBASIC14.24□□□□□ -0.13
HLA-DQB1P01920 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 AL645929.1-201ENST00000420084 975 ntBASIC14.24□□□□□ -0.13
HLA-DQB1P01920 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 AC011840.4-201ENST00000578471 627 ntBASIC14.24□□□□□ -0.13
HLA-DQB1P01920 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 AC011467.2-201ENST00000598425 242 ntBASIC14.24□□□□□ -0.13
HLA-DQB1P01920 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.24□□□□□ -0.13
HLA-DQB1P01920 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 AC087481.3-201ENST00000602886 1894 ntBASIC14.24□□□□□ -0.13
HLA-DQB1P01920 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HLA-DQB1P01920 KRT8P39-201ENST00000396270 1433 ntBASIC14.24□□□□□ -0.13
HLA-DQB1P01920 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HLA-DQB1P01920 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms