Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ALX3O95076 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ALX3O95076 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ALX3O95076 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ALX3O95076 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ALX3O95076 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ALX3O95076 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.66□□□□□ -0.06
ALX3O95076 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.66□□□□□ -0.06
ALX3O95076 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ALX3O95076 HLA-A-202ENST00000376806 1854 ntBASIC14.65□□□□□ -0.06
ALX3O95076 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.65□□□□□ -0.06
ALX3O95076 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.65□□□□□ -0.06
ALX3O95076 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ALX3O95076 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.65□□□□□ -0.06
ALX3O95076 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 ABCD1P5-201ENST00000445663 754 ntBASIC14.65□□□□□ -0.06
ALX3O95076 TOB2P1-201ENST00000469761 992 ntBASIC14.65□□□□□ -0.06
ALX3O95076 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.65□□□□□ -0.06
ALX3O95076 AC096582.2-201ENST00000510860 516 ntBASIC14.65□□□□□ -0.06
ALX3O95076 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.65□□□□□ -0.06
ALX3O95076 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.65□□□□□ -0.06
ALX3O95076 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ALX3O95076 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.65□□□□□ -0.06
ALX3O95076 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.65□□□□□ -0.06
ALX3O95076 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
ALX3O95076 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.65□□□□□ -0.06
ALX3O95076 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 AC148477.5-201ENST00000625164 1645 ntBASIC14.65□□□□□ -0.06
ALX3O95076 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ALX3O95076 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ALX3O95076 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ALX3O95076 AC079781.5-202ENST00000641784 3743 ntBASIC14.65□□□□□ -0.06
ALX3O95076 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ALX3O95076 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
ALX3O95076 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.64□□□□□ -0.07
ALX3O95076 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.64□□□□□ -0.07
ALX3O95076 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
ALX3O95076 AC092364.2-201ENST00000596710 2692 ntBASIC14.64□□□□□ -0.07
ALX3O95076 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
ALX3O95076 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.64□□□□□ -0.07
ALX3O95076 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.64□□□□□ -0.07
ALX3O95076 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.64□□□□□ -0.07
ALX3O95076 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ALX3O95076 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
ALX3O95076 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 PCED1CP-201ENST00000419887 785 ntBASIC14.64□□□□□ -0.07
ALX3O95076 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.64□□□□□ -0.07
ALX3O95076 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.64□□□□□ -0.07
ALX3O95076 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.64□□□□□ -0.07
ALX3O95076 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.64□□□□□ -0.07
ALX3O95076 AP002414.4-201ENST00000589764 1148 ntBASIC14.64□□□□□ -0.07
ALX3O95076 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.64□□□□□ -0.07
ALX3O95076 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.64□□□□□ -0.07
ALX3O95076 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ALX3O95076 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
ALX3O95076 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.64□□□□□ -0.07
ALX3O95076 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
ALX3O95076 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ALX3O95076 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ALX3O95076 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms