Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN5O00501 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN5O00501 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN5O00501 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN5O00501 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN5O00501 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CLDN5O00501 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
CLDN5O00501 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN5O00501 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN5O00501 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN5O00501 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN5O00501 FAM86GP-201ENST00000448322 971 ntBASIC17.33■□□□□ 0.36
CLDN5O00501 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDN5O00501 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
CLDN5O00501 RNA5SP410-201ENST00000516285 106 ntBASIC17.33■□□□□ 0.36
CLDN5O00501 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDN5O00501 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 DUX4L27-201ENST00000554796 1261 ntBASIC17.33■□□□□ 0.36
CLDN5O00501 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN5O00501 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN5O00501 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN5O00501 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN5O00501 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN5O00501 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CLDN5O00501 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CLDN5O00501 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN5O00501 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN5O00501 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN5O00501 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN5O00501 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN5O00501 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CLDN5O00501 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.32■□□□□ 0.36
CLDN5O00501 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN5O00501 TUBB3P1-201ENST00000405796 1332 ntBASIC17.32■□□□□ 0.36
CLDN5O00501 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CLDN5O00501 HLA-H-201ENST00000383620 1096 ntBASIC17.32■□□□□ 0.36
CLDN5O00501 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN5O00501 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN5O00501 CNN2P2-201ENST00000443536 909 ntBASIC17.32■□□□□ 0.36
CLDN5O00501 CNN2P3-201ENST00000450201 906 ntBASIC17.32■□□□□ 0.36
CLDN5O00501 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN5O00501 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
CLDN5O00501 AC003101.2-201ENST00000612557 442 ntBASIC17.32■□□□□ 0.36
CLDN5O00501 AL136317.3-201ENST00000618497 906 ntBASIC17.32■□□□□ 0.36
CLDN5O00501 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN5O00501 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN5O00501 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN5O00501 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN5O00501 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN5O00501 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLDN5O00501 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CLDN5O00501 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN5O00501 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN5O00501 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN5O00501 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN5O00501 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN5O00501 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CLDN5O00501 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLDN5O00501 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN5O00501 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLDN5O00501 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN5O00501 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN5O00501 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 AC092364.2-201ENST00000596710 2692 ntBASIC17.31■□□□□ 0.36
CLDN5O00501 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN5O00501 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 FAM220BP-201ENST00000377689 816 ntBASIC17.31■□□□□ 0.36
CLDN5O00501 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLDN5O00501 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.31■□□□□ 0.36
CLDN5O00501 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN5O00501 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN5O00501 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN5O00501 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN5O00501 AC051619.7-201ENST00000568314 623 ntBASIC17.31■□□□□ 0.36
CLDN5O00501 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN5O00501 AC018529.1-201ENST00000613063 361 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms