Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.5■□□□□ 0.55
DDX39AO00148 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.5■□□□□ 0.55
DDX39AO00148 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
DDX39AO00148 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.5■□□□□ 0.55
DDX39AO00148 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.5■□□□□ 0.55
DDX39AO00148 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.5■□□□□ 0.55
DDX39AO00148 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.5■□□□□ 0.55
DDX39AO00148 AL512356.2-201ENST00000546955 174 ntBASIC18.5■□□□□ 0.55
DDX39AO00148 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.5■□□□□ 0.55
DDX39AO00148 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC18.5■□□□□ 0.55
DDX39AO00148 AC003101.2-201ENST00000612557 442 ntBASIC18.5■□□□□ 0.55
DDX39AO00148 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
DDX39AO00148 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX39AO00148 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
DDX39AO00148 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX39AO00148 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
DDX39AO00148 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX39AO00148 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
DDX39AO00148 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
DDX39AO00148 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX39AO00148 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.49■□□□□ 0.55
DDX39AO00148 ALOX12P2-203ENST00000570921 1945 ntBASIC18.49■□□□□ 0.55
DDX39AO00148 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
DDX39AO00148 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX39AO00148 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
DDX39AO00148 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 MIR770-201ENST00000390219 98 ntBASIC18.49■□□□□ 0.55
DDX39AO00148 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX39AO00148 SPDYE7P-202ENST00000420373 878 ntBASIC18.49■□□□□ 0.55
DDX39AO00148 AC093724.1-201ENST00000448659 1027 ntBASIC18.49■□□□□ 0.55
DDX39AO00148 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.49■□□□□ 0.55
DDX39AO00148 KLF2P3-201ENST00000451977 1087 ntBASIC18.49■□□□□ 0.55
DDX39AO00148 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX39AO00148 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.49■□□□□ 0.55
DDX39AO00148 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX39AO00148 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.49■□□□□ 0.55
DDX39AO00148 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
DDX39AO00148 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
DDX39AO00148 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
DDX39AO00148 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.49■□□□□ 0.55
DDX39AO00148 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DDX39AO00148 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX39AO00148 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX39AO00148 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX39AO00148 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.48■□□□□ 0.55
DDX39AO00148 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DDX39AO00148 AC067863.1-201ENST00000494933 530 ntBASIC18.48■□□□□ 0.55
DDX39AO00148 RNA5SP410-201ENST00000516285 106 ntBASIC18.48■□□□□ 0.55
DDX39AO00148 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.48■□□□□ 0.55
DDX39AO00148 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.48■□□□□ 0.55
DDX39AO00148 AC005498.2-205ENST00000593218 784 ntBASIC18.48■□□□□ 0.55
DDX39AO00148 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
DDX39AO00148 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX39AO00148 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC18.48■□□□□ 0.55
DDX39AO00148 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.48■□□□□ 0.55
DDX39AO00148 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DDX39AO00148 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DDX39AO00148 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DDX39AO00148 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX39AO00148 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX39AO00148 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
DDX39AO00148 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.47■□□□□ 0.55
DDX39AO00148 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX39AO00148 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
DDX39AO00148 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
DDX39AO00148 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms