Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 NKILA-202ENST00000614771 2598 ntBASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 AL645728.1-201ENST00000366221 2101 ntBASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 GPS2P2-201ENST00000430745 888 ntBASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 AC093214.1-201ENST00000511688 1107 ntBASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 SLC25A39P2-201ENST00000537614 270 ntBASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 AC069262.1-201ENST00000539058 672 ntBASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 AC015911.4-201ENST00000588022 1070 ntBASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 AC013467.2-201ENST00000605472 835 ntBASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 AC008267.7-201ENST00000624570 1194 ntBASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
NPIPA2E9PIF3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 BCRP1-201ENST00000444246 691 ntBASIC15□□□□□ -0.01
NPIPA2E9PIF3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 AL512356.2-201ENST00000546955 174 ntBASIC15□□□□□ -0.01
NPIPA2E9PIF3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 AC026150.2-201ENST00000564693 1156 ntBASIC15□□□□□ -0.01
NPIPA2E9PIF3 AL096865.1-201ENST00000606796 927 ntBASIC15□□□□□ -0.01
NPIPA2E9PIF3 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
NPIPA2E9PIF3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
NPIPA2E9PIF3 RNF216P1-203ENST00000404404 2427 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms