Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 NSUN5P1-202ENST00000421140 1535 ntBASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 NSUN5P2-203ENST00000457352 1529 ntBASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 KRT17P6-201ENST00000453795 1220 ntBASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 SIGLEC16-201ENST00000599858 1437 ntBASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 KRT8P49-201ENST00000604166 1432 ntBASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
SH3PXD2BA1X283 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 LINC00982-205ENST00000420957 435 ntBASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 AC104819.1-201ENST00000504587 486 ntBASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 AC074051.2-201ENST00000565115 352 ntBASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SH3PXD2BA1X283 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SH3PXD2BA1X283 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms