Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LIN7CQ9NUP9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
LIN7CQ9NUP9 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LIN7CQ9NUP9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 OR7E14P-202ENST00000530490 1290 ntBASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 CYB561-217ENST00000582997 877 ntTSL 5 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 AC006557.2-201ENST00000592985 1240 ntBASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 TERC-201ENST00000602385 541 ntBASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 AC107918.4-202ENST00000641623 219 ntBASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LIN7CQ9NUP9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 AC093909.1-201ENST00000504731 1122 ntBASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 AC005052.1-201ENST00000625181 2492 ntBASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LIN7CQ9NUP9 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms