Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
KRTAP3-1Q9BYR8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 SSR4P1-203ENST00000599569 2260 ntBASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 AC243964.3-201ENST00000623022 2028 ntBASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 AC131009.4-201ENST00000624048 1740 ntBASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 AP005117.1-201ENST00000584346 1413 ntBASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 BX005266.1-201ENST00000473402 457 ntBASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 FAM86EP-206ENST00000510506 987 ntBASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 AP002414.4-201ENST00000589764 1148 ntBASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 GAPDHP74-202ENST00000632456 782 ntBASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 OR6D1P-203ENST00000641209 4860 ntBASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC8.41□□□□□ -1.06
KRTAP3-1Q9BYR8 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
KRTAP3-1Q9BYR8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC8.4□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms