Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RNF2Q99496 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RNF2Q99496 TSPY19P-201ENST00000418461 509 ntBASIC13.21□□□□□ -0.29
RNF2Q99496 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.21□□□□□ -0.29
RNF2Q99496 TSPY18P-201ENST00000441642 509 ntBASIC13.21□□□□□ -0.29
RNF2Q99496 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC13.21□□□□□ -0.29
RNF2Q99496 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.21□□□□□ -0.29
RNF2Q99496 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.21□□□□□ -0.29
RNF2Q99496 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC13.21□□□□□ -0.29
RNF2Q99496 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.21□□□□□ -0.29
RNF2Q99496 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RNF2Q99496 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.21□□□□□ -0.29
RNF2Q99496 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.21□□□□□ -0.29
RNF2Q99496 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF2Q99496 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF2Q99496 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
RNF2Q99496 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RNF2Q99496 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RNF2Q99496 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF2Q99496 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RNF2Q99496 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RNF2Q99496 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RNF2Q99496 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF2Q99496 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF2Q99496 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF2Q99496 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.21□□□□□ -0.3
RNF2Q99496 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF2Q99496 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RNF2Q99496 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RNF2Q99496 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RNF2Q99496 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF2Q99496 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RNF2Q99496 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RNF2Q99496 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RNF2Q99496 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF2Q99496 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC13.2□□□□□ -0.3
RNF2Q99496 SDHD-206ENST00000528182 754 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF2Q99496 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF2Q99496 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF2Q99496 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.2□□□□□ -0.3
RNF2Q99496 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC13.2□□□□□ -0.3
RNF2Q99496 LINC01711-201ENST00000598340 967 ntBASIC13.2□□□□□ -0.3
RNF2Q99496 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF2Q99496 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
RNF2Q99496 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RNF2Q99496 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RNF2Q99496 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
RNF2Q99496 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
RNF2Q99496 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC13.2□□□□□ -0.3
RNF2Q99496 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
RNF2Q99496 ALOX12P2-203ENST00000570921 1945 ntBASIC13.19□□□□□ -0.3
RNF2Q99496 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.19□□□□□ -0.3
RNF2Q99496 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF2Q99496 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms