Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 PRAL-201ENST00000624952 3286 ntBASIC14.23□□□□□ -0.13
CMTM3Q96MX0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CMTM3Q96MX0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 AL009178.2-201ENST00000597278 2719 ntBASIC14.22□□□□□ -0.13
CMTM3Q96MX0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 BX664615.1-201ENST00000443558 458 ntBASIC14.22□□□□□ -0.13
CMTM3Q96MX0 AC112907.2-201ENST00000448639 330 ntBASIC14.22□□□□□ -0.13
CMTM3Q96MX0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 VENTXP7-201ENST00000475503 772 ntBASIC14.22□□□□□ -0.13
CMTM3Q96MX0 YBX1P2-201ENST00000489612 999 ntBASIC14.22□□□□□ -0.13
CMTM3Q96MX0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 LINC01238-205ENST00000567549 1107 ntBASIC14.22□□□□□ -0.13
CMTM3Q96MX0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 AP000867.4-201ENST00000641616 219 ntBASIC14.22□□□□□ -0.13
CMTM3Q96MX0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC14.22□□□□□ -0.13
CMTM3Q96MX0 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 AC008677.1-201ENST00000519230 1561 ntBASIC14.22□□□□□ -0.13
CMTM3Q96MX0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CMTM3Q96MX0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 ATP5G1P1-201ENST00000448724 379 ntBASIC14.21□□□□□ -0.13
CMTM3Q96MX0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 AC145285.6-201ENST00000604632 637 ntBASIC14.21□□□□□ -0.13
CMTM3Q96MX0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
CMTM3Q96MX0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CMTM3Q96MX0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CMTM3Q96MX0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CMTM3Q96MX0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.21□□□□□ -0.14
CMTM3Q96MX0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.21□□□□□ -0.14
CMTM3Q96MX0 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CMTM3Q96MX0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CMTM3Q96MX0 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CMTM3Q96MX0 AC087481.3-201ENST00000602886 1894 ntBASIC14.21□□□□□ -0.14
CMTM3Q96MX0 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CMTM3Q96MX0 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms