Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP53Q96M91 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP53Q96M91 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP53Q96M91 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CFAP53Q96M91 ME2P1-201ENST00000426028 1970 ntBASIC21.98■■□□□ 1.11
CFAP53Q96M91 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP53Q96M91 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP53Q96M91 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 F11R-206ENST00000621309 4770 ntTSL 5 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP53Q96M91 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP53Q96M91 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP53Q96M91 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 CNN2P2-201ENST00000443536 909 ntBASIC21.97■■□□□ 1.11
CFAP53Q96M91 CNN2P3-201ENST00000450201 906 ntBASIC21.97■■□□□ 1.11
CFAP53Q96M91 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 AC069262.1-201ENST00000539058 672 ntBASIC21.97■■□□□ 1.11
CFAP53Q96M91 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 AL136317.3-201ENST00000618497 906 ntBASIC21.97■■□□□ 1.11
CFAP53Q96M91 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 Z92544.3-201ENST00000624747 417 ntBASIC21.97■■□□□ 1.11
CFAP53Q96M91 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP53Q96M91 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP53Q96M91 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CFAP53Q96M91 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC21.97■■□□□ 1.11
CFAP53Q96M91 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 AC009053.2-201ENST00000563701 2365 ntBASIC21.96■■□□□ 1.11
CFAP53Q96M91 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 RNA5SP410-201ENST00000516285 106 ntBASIC21.96■■□□□ 1.11
CFAP53Q96M91 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 MIR6080-201ENST00000617359 66 ntBASIC21.96■■□□□ 1.11
CFAP53Q96M91 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 RELA-227ENST00000615805 2236 ntTSL 5 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CFAP53Q96M91 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CFAP53Q96M91 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
CFAP53Q96M91 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.95■■□□□ 1.11
CFAP53Q96M91 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP53Q96M91 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP53Q96M91 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP53Q96M91 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP53Q96M91 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP53Q96M91 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 AC024267.1-201ENST00000582320 895 ntBASIC21.95■■□□□ 1.1
CFAP53Q96M91 AC015911.4-201ENST00000588022 1070 ntBASIC21.95■■□□□ 1.1
CFAP53Q96M91 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP53Q96M91 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
CFAP53Q96M91 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
CFAP53Q96M91 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms