Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 AC025062.2-201ENST00000605477 670 ntBASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
CHAMP1Q96JM3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHAMP1Q96JM3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHAMP1Q96JM3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 AL589182.2-201ENST00000619332 1049 ntBASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 AC136621.1-201ENST00000624017 2304 ntBASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CHAMP1Q96JM3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 AKR1C7P-201ENST00000305623 895 ntBASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 AL139288.1-201ENST00000623748 933 ntBASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHAMP1Q96JM3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 AL355877.3-201ENST00000622820 899 ntBASIC19.12■□□□□ 0.65
CHAMP1Q96JM3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms