Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.25■□□□□ 0.03
CNOT9Q92600 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.25■□□□□ 0.03
CNOT9Q92600 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CNOT9Q92600 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CNOT9Q92600 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT9Q92600 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT9Q92600 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.25■□□□□ 0.03
CNOT9Q92600 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT9Q92600 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CNOT9Q92600 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT9Q92600 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
CNOT9Q92600 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT9Q92600 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
CNOT9Q92600 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CNOT9Q92600 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CNOT9Q92600 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CNOT9Q92600 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CNOT9Q92600 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.24■□□□□ 0.03
CNOT9Q92600 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 AC010507.1-201ENST00000633895 436 ntBASIC15.24■□□□□ 0.03
CNOT9Q92600 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CNOT9Q92600 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT9Q92600 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CNOT9Q92600 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT9Q92600 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNOT9Q92600 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CNOT9Q92600 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT9Q92600 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.24■□□□□ 0.03
CNOT9Q92600 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.24■□□□□ 0.03
CNOT9Q92600 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNOT9Q92600 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNOT9Q92600 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CNOT9Q92600 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 RNU1-129P-201ENST00000384064 167 ntBASIC15.23■□□□□ 0.03
CNOT9Q92600 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 AL031432.2-201ENST00000566714 459 ntBASIC15.23■□□□□ 0.03
CNOT9Q92600 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.23■□□□□ 0.03
CNOT9Q92600 AL928711.1-201ENST00000570165 459 ntBASIC15.23■□□□□ 0.03
CNOT9Q92600 U1.21-201ENST00000580816 167 ntBASIC15.23■□□□□ 0.03
CNOT9Q92600 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.23■□□□□ 0.03
CNOT9Q92600 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.23■□□□□ 0.03
CNOT9Q92600 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 AC104109.2-201ENST00000602919 1418 ntBASIC15.23■□□□□ 0.03
CNOT9Q92600 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.23■□□□□ 0.03
CNOT9Q92600 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.23■□□□□ 0.03
CNOT9Q92600 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CNOT9Q92600 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.23■□□□□ 0.03
CNOT9Q92600 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNOT9Q92600 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNOT9Q92600 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT9Q92600 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT9Q92600 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT9Q92600 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT9Q92600 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.22■□□□□ 0.03
CNOT9Q92600 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT9Q92600 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNOT9Q92600 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms