Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 AC092183.1-201ENST00000469884 875 ntBASIC16.97■□□□□ 0.31
SCG3Q8WXD2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 AC010654.1-201ENST00000615722 808 ntBASIC16.97■□□□□ 0.31
SCG3Q8WXD2 AC004790.2-201ENST00000623588 572 ntBASIC16.97■□□□□ 0.31
SCG3Q8WXD2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 PAUPAR-201ENST00000630360 2965 ntBASIC16.97■□□□□ 0.31
SCG3Q8WXD2 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.97■□□□□ 0.31
SCG3Q8WXD2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 RNF216P1-203ENST00000404404 2427 ntBASIC16.96■□□□□ 0.31
SCG3Q8WXD2 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 AL139011.1-202ENST00000642063 584 ntBASIC16.96■□□□□ 0.31
SCG3Q8WXD2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCG3Q8WXD2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.96■□□□□ 0.3
SCG3Q8WXD2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SCG3Q8WXD2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.96■□□□□ 0.3
SCG3Q8WXD2 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
SCG3Q8WXD2 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SCG3Q8WXD2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SCG3Q8WXD2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.96■□□□□ 0.3
SCG3Q8WXD2 KRT8P49-201ENST00000604166 1432 ntBASIC16.96■□□□□ 0.3
SCG3Q8WXD2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.96■□□□□ 0.3
SCG3Q8WXD2 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 CYP2T1P-202ENST00000641596 2535 ntBASIC16.95■□□□□ 0.3
SCG3Q8WXD2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 PTCHD3P3-201ENST00000403073 906 ntBASIC16.95■□□□□ 0.3
SCG3Q8WXD2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 MCCD1P2-201ENST00000423228 335 ntBASIC16.95■□□□□ 0.3
SCG3Q8WXD2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 AC013467.2-201ENST00000605472 835 ntBASIC16.95■□□□□ 0.3
SCG3Q8WXD2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 AC055717.3-201ENST00000622967 595 ntBASIC16.95■□□□□ 0.3
SCG3Q8WXD2 AL513523.2-202ENST00000427283 2040 ntBASIC16.95■□□□□ 0.3
SCG3Q8WXD2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.95■□□□□ 0.3
SCG3Q8WXD2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms