Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 AC098859.1-201ENST00000502915 1238 ntBASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 AC026150.2-201ENST00000564693 1156 ntBASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 AC092171.3-201ENST00000610122 2651 ntBASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LRRTM4Q86VH4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.14■□□□□ 0.18
LRRTM4Q86VH4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 SPDYE14P-201ENST00000442619 822 ntBASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRTM4Q86VH4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 HLA-H-201ENST00000383620 1096 ntBASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 SPDYE7P-202ENST00000420373 878 ntBASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 AL645939.2-201ENST00000427340 991 ntBASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 POU5F1P6-201ENST00000466990 990 ntBASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 AL512356.2-201ENST00000546955 174 ntBASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 RARRES2P9-201ENST00000565168 469 ntBASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRTM4Q86VH4 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms