Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 AC109635.5-201ENST00000533593 962 ntBASIC17.32■□□□□ 0.36
RNF43Q68DV7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 AC190387.1-201ENST00000551683 408 ntBASIC17.32■□□□□ 0.36
RNF43Q68DV7 MIR4745-201ENST00000577608 62 ntBASIC17.32■□□□□ 0.36
RNF43Q68DV7 MIR3909-201ENST00000579518 119 ntBASIC17.32■□□□□ 0.36
RNF43Q68DV7 MPDU1-223ENST00000582151 728 ntBASIC17.32■□□□□ 0.36
RNF43Q68DV7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 AC004835.2-201ENST00000603762 682 ntBASIC17.32■□□□□ 0.36
RNF43Q68DV7 AL513210.1-201ENST00000629608 234 ntBASIC17.32■□□□□ 0.36
RNF43Q68DV7 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RNF43Q68DV7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.32■□□□□ 0.36
RNF43Q68DV7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF43Q68DV7 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 AC002056.1-201ENST00000395613 760 ntBASIC17.31■□□□□ 0.36
RNF43Q68DV7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 AC025678.2-201ENST00000562061 970 ntBASIC17.31■□□□□ 0.36
RNF43Q68DV7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.31■□□□□ 0.36
RNF43Q68DV7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF43Q68DV7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF43Q68DV7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.3■□□□□ 0.36
RNF43Q68DV7 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 AC112191.1-201ENST00000523689 701 ntBASIC17.3■□□□□ 0.36
RNF43Q68DV7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
RNF43Q68DV7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RNF43Q68DV7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms