Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC26.4■■□□□ 1.82
SNAPC4Q5SXM2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 EIF4HP1-201ENST00000453115 687 ntBASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 MIR4722-201ENST00000578292 60 ntBASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 MIR4706-201ENST00000582134 82 ntBASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 LARP4-220ENST00000615080 856 ntTSL 5 BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC26.39■■□□□ 1.82
SNAPC4Q5SXM2 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SNAPC4Q5SXM2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC26.39■■□□□ 1.81
SNAPC4Q5SXM2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
SNAPC4Q5SXM2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SNAPC4Q5SXM2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
SNAPC4Q5SXM2 RERG-209ENST00000546331 1383 ntTSL 2 BASIC26.39■■□□□ 1.81
SNAPC4Q5SXM2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SNAPC4Q5SXM2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC26.39■■□□□ 1.81
SNAPC4Q5SXM2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SNAPC4Q5SXM2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC26.39■■□□□ 1.81
SNAPC4Q5SXM2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 KRT18P64-201ENST00000434946 1219 ntBASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 TARDBPP1-201ENST00000442013 1203 ntBASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 AP006547.1-201ENST00000563435 692 ntBASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 U62317.3-201ENST00000608319 855 ntBASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 KRT8P37-201ENST00000451609 1420 ntBASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 AC138028.6-201ENST00000616106 1482 ntBASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC26.38■■□□□ 1.81
SNAPC4Q5SXM2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 NUS1P3-201ENST00000423502 862 ntBASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 AC093433.1-201ENST00000458048 571 ntBASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC26.37■■□□□ 1.81
SNAPC4Q5SXM2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 RPL13AP25-201ENST00000484130 612 ntBASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 ADM-202ENST00000524948 584 ntTSL 2 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 AP001063.1-201ENST00000568332 529 ntBASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 KRT8P19-201ENST00000551916 1455 ntBASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 REEP1-202ENST00000453231 940 ntTSL 2 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 AKR7A2P1-201ENST00000460134 915 ntBASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 AC022137.2-201ENST00000503482 481 ntBASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
SNAPC4Q5SXM2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms