Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.56■□□□□ 0.08
RPS3AP61247 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.56■□□□□ 0.08
RPS3AP61247 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.56■□□□□ 0.08
RPS3AP61247 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.56■□□□□ 0.08
RPS3AP61247 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.56■□□□□ 0.08
RPS3AP61247 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.56■□□□□ 0.08
RPS3AP61247 AC136632.2-201ENST00000512891 861 ntBASIC15.56■□□□□ 0.08
RPS3AP61247 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.56■□□□□ 0.08
RPS3AP61247 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
RPS3AP61247 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RPS3AP61247 AL049840.3-201ENST00000602669 611 ntBASIC15.56■□□□□ 0.08
RPS3AP61247 AL139424.1-201ENST00000607572 797 ntBASIC15.56■□□□□ 0.08
RPS3AP61247 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.56■□□□□ 0.08
RPS3AP61247 AC004706.3-202ENST00000621574 984 ntBASIC15.56■□□□□ 0.08
RPS3AP61247 IL9RP2-201ENST00000423948 1312 ntBASIC15.56■□□□□ 0.08
RPS3AP61247 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.56■□□□□ 0.08
RPS3AP61247 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RPS3AP61247 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RPS3AP61247 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
RPS3AP61247 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RPS3AP61247 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.56■□□□□ 0.08
RPS3AP61247 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RPS3AP61247 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
RPS3AP61247 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RPS3AP61247 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RPS3AP61247 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.55■□□□□ 0.08
RPS3AP61247 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.55■□□□□ 0.08
RPS3AP61247 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.55■□□□□ 0.08
RPS3AP61247 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RPS3AP61247 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.55■□□□□ 0.08
RPS3AP61247 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.55■□□□□ 0.08
RPS3AP61247 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.55■□□□□ 0.08
RPS3AP61247 LINC00982-205ENST00000420957 435 ntBASIC15.55■□□□□ 0.08
RPS3AP61247 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.55■□□□□ 0.08
RPS3AP61247 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 AL356488.2-201ENST00000602755 427 ntBASIC15.55■□□□□ 0.08
RPS3AP61247 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
RPS3AP61247 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.55■□□□□ 0.08
RPS3AP61247 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.55■□□□□ 0.08
RPS3AP61247 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.55■□□□□ 0.08
RPS3AP61247 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RPS3AP61247 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RPS3AP61247 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS3AP61247 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS3AP61247 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RPS3AP61247 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS3AP61247 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RPS3AP61247 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS3AP61247 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 ZNF259P1-201ENST00000407656 1365 ntBASIC15.54■□□□□ 0.08
RPS3AP61247 AC243591.1-201ENST00000452967 1364 ntBASIC15.54■□□□□ 0.08
RPS3AP61247 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS3AP61247 PKD1P5-201ENST00000532415 10291 ntBASIC15.54■□□□□ 0.08
RPS3AP61247 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RPS3AP61247 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.54■□□□□ 0.08
RPS3AP61247 AL022342.1-201ENST00000400363 863 ntBASIC15.54■□□□□ 0.08
RPS3AP61247 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms