Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA2P51531 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA2P51531 AC105129.2-201ENST00000559536 390 ntBASIC28.67■■■□□ 2.18
SMARCA2P51531 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC28.67■■■□□ 2.18
SMARCA2P51531 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCA2P51531 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC28.67■■■□□ 2.18
SMARCA2P51531 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA2P51531 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCA2P51531 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA2P51531 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCA2P51531 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC28.67■■■□□ 2.18
SMARCA2P51531 KRT8P37-201ENST00000451609 1420 ntBASIC28.67■■■□□ 2.18
SMARCA2P51531 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA2P51531 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
SMARCA2P51531 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA2P51531 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCA2P51531 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC28.67■■■□□ 2.18
SMARCA2P51531 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCA2P51531 AP001063.1-201ENST00000568332 529 ntBASIC28.67■■■□□ 2.18
SMARCA2P51531 AC091271.1-201ENST00000611877 1162 ntBASIC28.67■■■□□ 2.18
SMARCA2P51531 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SMARCA2P51531 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC28.67■■■□□ 2.18
SMARCA2P51531 AL008638.5-201ENST00000623814 1298 ntBASIC28.67■■■□□ 2.18
SMARCA2P51531 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC28.66■■■□□ 2.18
SMARCA2P51531 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC28.66■■■□□ 2.18
SMARCA2P51531 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC28.66■■■□□ 2.18
SMARCA2P51531 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
SMARCA2P51531 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
SMARCA2P51531 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 PP12613-201ENST00000424958 2230 ntBASIC28.66■■■□□ 2.18
SMARCA2P51531 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC28.66■■■□□ 2.18
SMARCA2P51531 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
SMARCA2P51531 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 BRF1-202ENST00000379932 884 ntTSL 5 BASIC28.66■■■□□ 2.18
SMARCA2P51531 MIR663B-201ENST00000408361 115 ntBASIC28.66■■■□□ 2.18
SMARCA2P51531 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC28.66■■■□□ 2.18
SMARCA2P51531 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC28.66■■■□□ 2.18
SMARCA2P51531 VDAC1P7-201ENST00000462417 847 ntBASIC28.66■■■□□ 2.18
SMARCA2P51531 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC28.66■■■□□ 2.18
SMARCA2P51531 RPL8-205ENST00000527914 551 ntTSL 3 BASIC28.66■■■□□ 2.18
SMARCA2P51531 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC28.66■■■□□ 2.18
SMARCA2P51531 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SMARCA2P51531 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC28.66■■■□□ 2.18
SMARCA2P51531 LARP4-220ENST00000615080 856 ntTSL 5 BASIC28.66■■■□□ 2.18
SMARCA2P51531 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
SMARCA2P51531 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC28.66■■■□□ 2.18
SMARCA2P51531 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC28.66■■■□□ 2.18
SMARCA2P51531 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC28.65■■■□□ 2.18
SMARCA2P51531 PCGF3-213ENST00000620529 1899 ntBASIC28.65■■■□□ 2.18
SMARCA2P51531 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 AC134312.5-201ENST00000568031 1313 ntBASIC28.65■■■□□ 2.18
SMARCA2P51531 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
SMARCA2P51531 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC28.65■■■□□ 2.18
SMARCA2P51531 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC28.65■■■□□ 2.18
SMARCA2P51531 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC28.65■■■□□ 2.18
SMARCA2P51531 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC28.65■■■□□ 2.18
SMARCA2P51531 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SMARCA2P51531 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC28.65■■■□□ 2.18
SMARCA2P51531 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA2P51531 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA2P51531 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA2P51531 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC28.64■■■□□ 2.18
SMARCA2P51531 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA2P51531 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA2P51531 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA2P51531 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC28.64■■■□□ 2.18
SMARCA2P51531 AC004987.2-201ENST00000395959 1148 ntBASIC28.64■■■□□ 2.18
SMARCA2P51531 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC28.64■■■□□ 2.18
SMARCA2P51531 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC28.64■■■□□ 2.18
SMARCA2P51531 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC28.64■■■□□ 2.18
SMARCA2P51531 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA2P51531 OARD1-212ENST00000482515 832 ntTSL 2 BASIC28.64■■■□□ 2.18
SMARCA2P51531 SLED1-202ENST00000512051 380 ntBASIC28.64■■■□□ 2.18
SMARCA2P51531 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA2P51531 AC000095.1-201ENST00000603208 874 ntBASIC28.64■■■□□ 2.18
SMARCA2P51531 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC28.64■■■□□ 2.18
SMARCA2P51531 AC015967.2-201ENST00000624092 234 ntBASIC28.64■■■□□ 2.18
SMARCA2P51531 AC006435.4-201ENST00000625037 234 ntBASIC28.64■■■□□ 2.18
SMARCA2P51531 AL356737.1-201ENST00000634391 234 ntBASIC28.64■■■□□ 2.18
SMARCA2P51531 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
SMARCA2P51531 HARS-202ENST00000415192 1401 ntTSL 2 BASIC28.64■■■□□ 2.18
SMARCA2P51531 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms