Protein–RNA interactions for Protein: P50991

CCT4, T-complex protein 1 subunit delta, humanhuman

Known RBP Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4P50991 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CCT4P50991 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
CCT4P50991 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCT4P50991 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.75■□□□□ 0.91
CCT4P50991 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.75■□□□□ 0.91
CCT4P50991 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CCT4P50991 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.75■□□□□ 0.91
CCT4P50991 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCT4P50991 AL118508.1-201ENST00000613502 2345 ntBASIC20.75■□□□□ 0.91
CCT4P50991 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CCT4P50991 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.74■□□□□ 0.91
CCT4P50991 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCT4P50991 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC20.74■□□□□ 0.91
CCT4P50991 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CCT4P50991 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.74■□□□□ 0.91
CCT4P50991 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC20.74■□□□□ 0.91
CCT4P50991 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.74■□□□□ 0.91
CCT4P50991 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.74■□□□□ 0.91
CCT4P50991 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 AL512356.2-201ENST00000546955 174 ntBASIC20.74■□□□□ 0.91
CCT4P50991 AL390955.2-201ENST00000603032 514 ntBASIC20.74■□□□□ 0.91
CCT4P50991 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.74■□□□□ 0.91
CCT4P50991 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.74■□□□□ 0.91
CCT4P50991 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CCT4P50991 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.74■□□□□ 0.91
CCT4P50991 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCT4P50991 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC20.74■□□□□ 0.91
CCT4P50991 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CCT4P50991 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CCT4P50991 UXT-AS1-201ENST00000590504 1525 ntBASIC20.73■□□□□ 0.91
CCT4P50991 AL589702.1-201ENST00000641229 1509 ntBASIC20.73■□□□□ 0.91
CCT4P50991 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 U82695.1-201ENST00000635752 1889 ntBASIC20.73■□□□□ 0.91
CCT4P50991 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CCT4P50991 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
CCT4P50991 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.73■□□□□ 0.91
CCT4P50991 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CCT4P50991 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.73■□□□□ 0.91
CCT4P50991 AC067863.1-201ENST00000494933 530 ntBASIC20.73■□□□□ 0.91
CCT4P50991 AC098859.1-201ENST00000502915 1238 ntBASIC20.73■□□□□ 0.91
CCT4P50991 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.73■□□□□ 0.91
CCT4P50991 DUX4L27-201ENST00000554796 1261 ntBASIC20.73■□□□□ 0.91
CCT4P50991 DUT-210ENST00000559935 569 ntTSL 3 BASIC20.73■□□□□ 0.91
CCT4P50991 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC20.73■□□□□ 0.91
CCT4P50991 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.73■□□□□ 0.91
CCT4P50991 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.73■□□□□ 0.91
CCT4P50991 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC20.73■□□□□ 0.91
CCT4P50991 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.73■□□□□ 0.91
CCT4P50991 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC20.73■□□□□ 0.91
CCT4P50991 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CCT4P50991 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCT4P50991 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.72■□□□□ 0.91
CCT4P50991 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CCT4P50991 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC20.72■□□□□ 0.91
CCT4P50991 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CCT4P50991 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC20.72■□□□□ 0.91
CCT4P50991 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCT4P50991 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
CCT4P50991 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.72■□□□□ 0.91
CCT4P50991 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.72■□□□□ 0.91
CCT4P50991 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC20.72■□□□□ 0.91
CCT4P50991 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC20.72■□□□□ 0.91
CCT4P50991 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCT4P50991 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCT4P50991 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCT4P50991 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCT4P50991 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CCT4P50991 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.72■□□□□ 0.91
CCT4P50991 SLC25A39P2-201ENST00000537614 270 ntBASIC20.72■□□□□ 0.91
CCT4P50991 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CCT4P50991 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.72■□□□□ 0.91
CCT4P50991 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms