Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIK1P39086 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIK1P39086 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIK1P39086 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
GRIK1P39086 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIK1P39086 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
GRIK1P39086 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.36■□□□□ 0.37
GRIK1P39086 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIK1P39086 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.36■□□□□ 0.37
GRIK1P39086 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
GRIK1P39086 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 PCGF3-213ENST00000620529 1899 ntBASIC17.35■□□□□ 0.37
GRIK1P39086 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.35■□□□□ 0.37
GRIK1P39086 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GRIK1P39086 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.35■□□□□ 0.37
GRIK1P39086 AC125807.1-201ENST00000483097 614 ntBASIC17.35■□□□□ 0.37
GRIK1P39086 AC098859.1-201ENST00000502915 1238 ntBASIC17.35■□□□□ 0.37
GRIK1P39086 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.35■□□□□ 0.37
GRIK1P39086 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.35■□□□□ 0.37
GRIK1P39086 MIR4453-201ENST00000584019 89 ntBASIC17.35■□□□□ 0.37
GRIK1P39086 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.35■□□□□ 0.37
GRIK1P39086 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.35■□□□□ 0.37
GRIK1P39086 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
GRIK1P39086 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.35■□□□□ 0.37
GRIK1P39086 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.35■□□□□ 0.37
GRIK1P39086 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
GRIK1P39086 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.35■□□□□ 0.37
GRIK1P39086 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.35■□□□□ 0.37
GRIK1P39086 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.35■□□□□ 0.37
GRIK1P39086 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.35■□□□□ 0.37
GRIK1P39086 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
GRIK1P39086 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.34■□□□□ 0.37
GRIK1P39086 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
GRIK1P39086 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 HLA-H-201ENST00000383620 1096 ntBASIC17.34■□□□□ 0.37
GRIK1P39086 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.34■□□□□ 0.37
GRIK1P39086 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
GRIK1P39086 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.34■□□□□ 0.37
GRIK1P39086 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.34■□□□□ 0.37
GRIK1P39086 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.34■□□□□ 0.37
GRIK1P39086 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.34■□□□□ 0.37
GRIK1P39086 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.34■□□□□ 0.37
GRIK1P39086 AC051619.7-201ENST00000568314 623 ntBASIC17.34■□□□□ 0.37
GRIK1P39086 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.34■□□□□ 0.37
GRIK1P39086 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.34■□□□□ 0.37
GRIK1P39086 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.34■□□□□ 0.37
GRIK1P39086 AC003101.2-201ENST00000612557 442 ntBASIC17.34■□□□□ 0.37
GRIK1P39086 AC018529.1-201ENST00000613063 361 ntBASIC17.34■□□□□ 0.37
GRIK1P39086 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.34■□□□□ 0.37
GRIK1P39086 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.34■□□□□ 0.37
GRIK1P39086 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
GRIK1P39086 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.33■□□□□ 0.37
GRIK1P39086 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GRIK1P39086 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GRIK1P39086 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GRIK1P39086 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
GRIK1P39086 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.33■□□□□ 0.37
GRIK1P39086 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
GRIK1P39086 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.33■□□□□ 0.37
GRIK1P39086 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.33■□□□□ 0.37
GRIK1P39086 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
GRIK1P39086 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GRIK1P39086 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
GRIK1P39086 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
GRIK1P39086 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
GRIK1P39086 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.33■□□□□ 0.36
GRIK1P39086 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GRIK1P39086 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GRIK1P39086 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
GRIK1P39086 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GRIK1P39086 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GRIK1P39086 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
GRIK1P39086 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
GRIK1P39086 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
GRIK1P39086 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
GRIK1P39086 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
GRIK1P39086 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms