Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.1■□□□□ 0.33
SCNN1AP37088 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.1■□□□□ 0.33
SCNN1AP37088 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.1■□□□□ 0.33
SCNN1AP37088 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.1■□□□□ 0.33
SCNN1AP37088 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 AC024267.1-201ENST00000582320 895 ntBASIC17.1■□□□□ 0.33
SCNN1AP37088 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.1■□□□□ 0.33
SCNN1AP37088 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCNN1AP37088 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.1■□□□□ 0.33
SCNN1AP37088 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SCNN1AP37088 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SCNN1AP37088 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.1■□□□□ 0.33
SCNN1AP37088 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SCNN1AP37088 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
SCNN1AP37088 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCNN1AP37088 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.1■□□□□ 0.33
SCNN1AP37088 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SCNN1AP37088 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 AC026691.1-201ENST00000602502 2017 ntBASIC17.09■□□□□ 0.33
SCNN1AP37088 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SCNN1AP37088 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.09■□□□□ 0.33
SCNN1AP37088 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.09■□□□□ 0.33
SCNN1AP37088 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.09■□□□□ 0.33
SCNN1AP37088 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 KRT18P13-201ENST00000400056 1290 ntBASIC17.09■□□□□ 0.33
SCNN1AP37088 AC004461.1-201ENST00000412461 403 ntBASIC17.09■□□□□ 0.33
SCNN1AP37088 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
SCNN1AP37088 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.09■□□□□ 0.33
SCNN1AP37088 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.09■□□□□ 0.33
SCNN1AP37088 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
SCNN1AP37088 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.09■□□□□ 0.33
SCNN1AP37088 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.09■□□□□ 0.33
SCNN1AP37088 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.09■□□□□ 0.33
SCNN1AP37088 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SCNN1AP37088 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SCNN1AP37088 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SCNN1AP37088 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.09■□□□□ 0.33
SCNN1AP37088 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SCNN1AP37088 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCNN1AP37088 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCNN1AP37088 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.08■□□□□ 0.33
SCNN1AP37088 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCNN1AP37088 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.08■□□□□ 0.33
SCNN1AP37088 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.08■□□□□ 0.33
SCNN1AP37088 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.08■□□□□ 0.33
SCNN1AP37088 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
SCNN1AP37088 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCNN1AP37088 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SCNN1AP37088 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SCNN1AP37088 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SCNN1AP37088 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCNN1AP37088 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCNN1AP37088 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCNN1AP37088 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.08■□□□□ 0.32
SCNN1AP37088 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.08■□□□□ 0.32
SCNN1AP37088 HLA-H-201ENST00000383620 1096 ntBASIC17.08■□□□□ 0.32
SCNN1AP37088 AC211486.1-202ENST00000416371 468 ntBASIC17.08■□□□□ 0.32
SCNN1AP37088 AC254562.1-201ENST00000417586 456 ntBASIC17.08■□□□□ 0.32
SCNN1AP37088 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.08■□□□□ 0.32
SCNN1AP37088 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.08■□□□□ 0.32
SCNN1AP37088 AC211476.1-201ENST00000503899 468 ntBASIC17.08■□□□□ 0.32
SCNN1AP37088 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.08■□□□□ 0.32
SCNN1AP37088 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.08■□□□□ 0.32
SCNN1AP37088 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.08■□□□□ 0.32
SCNN1AP37088 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC17.08■□□□□ 0.32
SCNN1AP37088 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.08■□□□□ 0.32
SCNN1AP37088 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.08■□□□□ 0.32
SCNN1AP37088 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.08■□□□□ 0.32
SCNN1AP37088 AC061975.2-201ENST00000581722 295 ntBASIC17.08■□□□□ 0.32
SCNN1AP37088 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.08■□□□□ 0.32
SCNN1AP37088 AC023511.2-201ENST00000618803 211 ntBASIC17.08■□□□□ 0.32
SCNN1AP37088 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCNN1AP37088 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCNN1AP37088 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCNN1AP37088 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
SCNN1AP37088 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCNN1AP37088 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCNN1AP37088 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms