Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX6P35712 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX6P35712 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
SOX6P35712 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.86□□□□□ -0.03
SOX6P35712 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.86□□□□□ -0.03
SOX6P35712 AC004263.2-201ENST00000617183 678 ntBASIC14.86□□□□□ -0.03
SOX6P35712 AL157888.1-201ENST00000631930 593 ntBASIC14.86□□□□□ -0.03
SOX6P35712 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SOX6P35712 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SOX6P35712 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
SOX6P35712 CDC14C-201ENST00000428251 1719 ntBASIC14.86□□□□□ -0.03
SOX6P35712 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX6P35712 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
SOX6P35712 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX6P35712 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.86□□□□□ -0.03
SOX6P35712 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SOX6P35712 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SOX6P35712 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX6P35712 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 GGT3P-204ENST00000453783 1664 ntBASIC14.85□□□□□ -0.03
SOX6P35712 AL135999.2-201ENST00000622438 1686 ntBASIC14.85□□□□□ -0.03
SOX6P35712 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.85□□□□□ -0.03
SOX6P35712 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SOX6P35712 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.85□□□□□ -0.03
SOX6P35712 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX6P35712 AL137013.1-201ENST00000432946 1228 ntBASIC14.85□□□□□ -0.03
SOX6P35712 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC14.85□□□□□ -0.03
SOX6P35712 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX6P35712 MTCL1P1-201ENST00000446207 792 ntBASIC14.85□□□□□ -0.03
SOX6P35712 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX6P35712 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX6P35712 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
SOX6P35712 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 AL139011.1-202ENST00000642063 584 ntBASIC14.85□□□□□ -0.03
SOX6P35712 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX6P35712 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX6P35712 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.85□□□□□ -0.03
SOX6P35712 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.85□□□□□ -0.03
SOX6P35712 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SOX6P35712 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
SOX6P35712 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.84□□□□□ -0.03
SOX6P35712 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SOX6P35712 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.84□□□□□ -0.03
SOX6P35712 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.84□□□□□ -0.03
SOX6P35712 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
SOX6P35712 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SOX6P35712 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
SOX6P35712 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SOX6P35712 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SOX6P35712 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms