Protein–RNA interactions for Protein: P0CG01

GKN3P, Gastrokine-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN3PP0CG01 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GKN3PP0CG01 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 CICP6-201ENST00000457191 2729 ntBASIC15.25■□□□□ 0.03
GKN3PP0CG01 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 CXCL1P1-201ENST00000502804 216 ntBASIC15.25■□□□□ 0.03
GKN3PP0CG01 AC093909.1-201ENST00000504731 1122 ntBASIC15.25■□□□□ 0.03
GKN3PP0CG01 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
GKN3PP0CG01 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.25■□□□□ 0.03
GKN3PP0CG01 AC132872.4-202ENST00000622924 2756 ntBASIC15.24■□□□□ 0.03
GKN3PP0CG01 AL162727.3-201ENST00000635661 2787 ntBASIC15.24■□□□□ 0.03
GKN3PP0CG01 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 PRSS29P-201ENST00000440800 595 ntBASIC15.24■□□□□ 0.03
GKN3PP0CG01 AC009947.1-201ENST00000444350 727 ntBASIC15.24■□□□□ 0.03
GKN3PP0CG01 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 RNA5SP415-201ENST00000517246 115 ntBASIC15.24■□□□□ 0.03
GKN3PP0CG01 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
GKN3PP0CG01 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 MST1L-201ENST00000442552 2185 ntBASIC15.24■□□□□ 0.03
GKN3PP0CG01 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.24■□□□□ 0.03
GKN3PP0CG01 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GKN3PP0CG01 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GKN3PP0CG01 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GKN3PP0CG01 AL513477.1-201ENST00000602865 2407 ntBASIC15.23■□□□□ 0.03
GKN3PP0CG01 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GKN3PP0CG01 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GKN3PP0CG01 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
GKN3PP0CG01 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
GKN3PP0CG01 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
GKN3PP0CG01 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms