Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 LAGE3P1-201ENST00000425356 484 ntBASIC14.88□□□□□ -0.03
HLA-DQA2P01906 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 AC021087.4-201ENST00000563761 564 ntBASIC14.88□□□□□ -0.03
HLA-DQA2P01906 MPDU1-223ENST00000582151 728 ntBASIC14.88□□□□□ -0.03
HLA-DQA2P01906 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HLA-DQA2P01906 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 AC131009.4-201ENST00000624048 1740 ntBASIC14.87□□□□□ -0.03
HLA-DQA2P01906 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 AC073648.2-201ENST00000510116 352 ntBASIC14.87□□□□□ -0.03
HLA-DQA2P01906 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 AC025062.2-201ENST00000605477 670 ntBASIC14.87□□□□□ -0.03
HLA-DQA2P01906 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HLA-DQA2P01906 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA2P01906 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA2P01906 CICP6-201ENST00000457191 2729 ntBASIC14.86□□□□□ -0.03
HLA-DQA2P01906 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA2P01906 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA2P01906 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA2P01906 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.86□□□□□ -0.03
HLA-DQA2P01906 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA2P01906 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
HLA-DQA2P01906 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms