Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.6■□□□□ 0.25
GPC4O75487 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GPC4O75487 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.6■□□□□ 0.25
GPC4O75487 AL590627.1-203ENST00000421194 1026 ntBASIC16.6■□□□□ 0.25
GPC4O75487 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
GPC4O75487 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.6■□□□□ 0.25
GPC4O75487 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.6■□□□□ 0.25
GPC4O75487 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.6■□□□□ 0.25
GPC4O75487 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.6■□□□□ 0.25
GPC4O75487 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.6■□□□□ 0.25
GPC4O75487 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.6■□□□□ 0.25
GPC4O75487 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.6■□□□□ 0.25
GPC4O75487 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
GPC4O75487 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.6■□□□□ 0.25
GPC4O75487 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.6■□□□□ 0.25
GPC4O75487 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
GPC4O75487 AL645728.1-201ENST00000366221 2101 ntBASIC16.6■□□□□ 0.25
GPC4O75487 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
GPC4O75487 LINC00895-201ENST00000629028 1637 ntBASIC16.59■□□□□ 0.25
GPC4O75487 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GPC4O75487 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.59■□□□□ 0.25
GPC4O75487 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
GPC4O75487 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
GPC4O75487 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GPC4O75487 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
GPC4O75487 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.59■□□□□ 0.25
GPC4O75487 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 VN2R19P-201ENST00000442399 1052 ntBASIC16.59■□□□□ 0.25
GPC4O75487 RPL13AP23-201ENST00000480739 586 ntBASIC16.59■□□□□ 0.25
GPC4O75487 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.59■□□□□ 0.25
GPC4O75487 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.59■□□□□ 0.25
GPC4O75487 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
GPC4O75487 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.59■□□□□ 0.25
GPC4O75487 AC034105.1-201ENST00000563488 319 ntBASIC16.59■□□□□ 0.25
GPC4O75487 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 AC013467.2-201ENST00000605472 835 ntBASIC16.59■□□□□ 0.25
GPC4O75487 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.59■□□□□ 0.25
GPC4O75487 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.59■□□□□ 0.25
GPC4O75487 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
GPC4O75487 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.59■□□□□ 0.25
GPC4O75487 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.59■□□□□ 0.25
GPC4O75487 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
GPC4O75487 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.59■□□□□ 0.25
GPC4O75487 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.59■□□□□ 0.25
GPC4O75487 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
GPC4O75487 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
GPC4O75487 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
GPC4O75487 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GPC4O75487 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
GPC4O75487 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
GPC4O75487 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.58■□□□□ 0.25
GPC4O75487 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
GPC4O75487 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
GPC4O75487 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
GPC4O75487 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
GPC4O75487 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GPC4O75487 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
GPC4O75487 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
GPC4O75487 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.58■□□□□ 0.24
GPC4O75487 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.58■□□□□ 0.24
GPC4O75487 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.58■□□□□ 0.24
GPC4O75487 FAM185BP-201ENST00000443595 716 ntBASIC16.58■□□□□ 0.24
GPC4O75487 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.58■□□□□ 0.24
GPC4O75487 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.58■□□□□ 0.24
GPC4O75487 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.58■□□□□ 0.24
GPC4O75487 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.58■□□□□ 0.24
GPC4O75487 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.58■□□□□ 0.24
GPC4O75487 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.58■□□□□ 0.24
GPC4O75487 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.58■□□□□ 0.24
GPC4O75487 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
GPC4O75487 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.58■□□□□ 0.24
GPC4O75487 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
GPC4O75487 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms