Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
YJEFN3A6XGL0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.16■□□□□ 0.34
YJEFN3A6XGL0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YJEFN3A6XGL0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
YJEFN3A6XGL0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
YJEFN3A6XGL0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YJEFN3A6XGL0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.16■□□□□ 0.34
YJEFN3A6XGL0 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
YJEFN3A6XGL0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
YJEFN3A6XGL0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 SPDYE14P-201ENST00000442619 822 ntBASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 AC026150.2-201ENST00000564693 1156 ntBASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 AC093028.1-201ENST00000622998 982 ntBASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 AP3S2-216ENST00000617003 1561 ntBASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.15■□□□□ 0.34
YJEFN3A6XGL0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 PCDH8P1-201ENST00000428983 2773 ntBASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.14■□□□□ 0.33
YJEFN3A6XGL0 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 OR6D1P-203ENST00000641209 4860 ntBASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 AC004449.1-201ENST00000564240 433 ntBASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 RARRES2P9-201ENST00000565168 469 ntBASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
YJEFN3A6XGL0 AP001059.3-201ENST00000619053 235 ntBASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms