Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 PRSS29P-201ENST00000440800 595 ntBASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 HLA-J-202ENST00000469281 1241 ntBASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 AC107918.2-201ENST00000530817 355 ntBASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 MIR4751-201ENST00000578027 74 ntBASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 MPDU1-223ENST00000582151 728 ntBASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 AL139011.1-202ENST00000642063 584 ntBASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 HLA-A-201ENST00000376802 1334 ntBASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.5□□□□□ -0.41
HLA-DRB4X5D2U9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 AC004790.2-201ENST00000623588 572 ntBASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 AP001350.2-201ENST00000625104 1094 ntBASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
HLA-DRB4X5D2U9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms