Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 AC106886.4-201ENST00000623557 2502 ntBASIC14.14□□□□□ -0.15
GCM1Q9NP62 RNF216P1-203ENST00000404404 2427 ntBASIC14.14□□□□□ -0.15
GCM1Q9NP62 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
GCM1Q9NP62 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.14□□□□□ -0.15
GCM1Q9NP62 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 AL603756.1-201ENST00000606511 2163 ntBASIC14.13□□□□□ -0.15
GCM1Q9NP62 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 AC002056.1-201ENST00000395613 760 ntBASIC14.13□□□□□ -0.15
GCM1Q9NP62 RPSAP43-201ENST00000402237 625 ntBASIC14.13□□□□□ -0.15
GCM1Q9NP62 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 MKNK2P1-201ENST00000437526 628 ntBASIC14.13□□□□□ -0.15
GCM1Q9NP62 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 AC112482.1-201ENST00000492080 688 ntBASIC14.13□□□□□ -0.15
GCM1Q9NP62 AC005829.1-201ENST00000570002 483 ntBASIC14.13□□□□□ -0.15
GCM1Q9NP62 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 AL009183.1-201ENST00000603760 355 ntBASIC14.13□□□□□ -0.15
GCM1Q9NP62 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 KRT8P39-201ENST00000396270 1433 ntBASIC14.13□□□□□ -0.15
GCM1Q9NP62 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.13□□□□□ -0.15
GCM1Q9NP62 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GCM1Q9NP62 AC078925.2-201ENST00000624013 1973 ntBASIC14.13□□□□□ -0.15
GCM1Q9NP62 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GCM1Q9NP62 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GCM1Q9NP62 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.12□□□□□ -0.15
GCM1Q9NP62 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
GCM1Q9NP62 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GCM1Q9NP62 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms