Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.75□□□□□ -0.05
NELFAQ9H3P2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 PDPK2P-202ENST00000562415 1191 ntBASIC14.75□□□□□ -0.05
NELFAQ9H3P2 MIR4515-201ENST00000584082 81 ntBASIC14.75□□□□□ -0.05
NELFAQ9H3P2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 AC023141.13-201ENST00000604991 943 ntBASIC14.75□□□□□ -0.05
NELFAQ9H3P2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.75□□□□□ -0.05
NELFAQ9H3P2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 HMGA1P7-201ENST00000406908 502 ntBASIC14.74□□□□□ -0.05
NELFAQ9H3P2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.74□□□□□ -0.05
NELFAQ9H3P2 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 AC007064.4-201ENST00000637740 555 ntBASIC14.74□□□□□ -0.05
NELFAQ9H3P2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 AC012569.1-201ENST00000591191 1524 ntBASIC14.74□□□□□ -0.05
NELFAQ9H3P2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NELFAQ9H3P2 AL671710.1-201ENST00000610245 2349 ntBASIC14.74□□□□□ -0.05
NELFAQ9H3P2 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NELFAQ9H3P2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms