Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.842e-8■□□□□ 9.6
CSTF2TQ9H0L4 IDI1-205ENST00000491735 1066 ntTSL 1 (best)18.34■□□□□ 0.532e-8■□□□□ 9.6
CSTF2TQ9H0L4 PAPOLA-205ENST00000553689 2267 ntTSL 1 (best)18.33■□□□□ 0.532e-10■□□□□ 9.6
CSTF2TQ9H0L4 GRK6-204ENST00000502598 557 ntTSL 417.96■□□□□ 0.472e-6■□□□□ 9.6
CSTF2TQ9H0L4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.292e-6■□□□□ 9.6
CSTF2TQ9H0L4 GRK6-205ENST00000506296 955 ntTSL 516.75■□□□□ 0.272e-6■□□□□ 9.6
CSTF2TQ9H0L4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.22e-6■□□□□ 9.6
CSTF2TQ9H0L4 GRK6-208ENST00000511244 555 ntTSL 415.54■□□□□ 0.082e-6■□□□□ 9.6
CSTF2TQ9H0L4 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.73□□□□□ -0.052e-10■□□□□ 9.6
CSTF2TQ9H0L4 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.13□□□□□ -0.152e-6■□□□□ 9.6
CSTF2TQ9H0L4 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14□□□□□ -0.172e-6■□□□□ 9.6
CSTF2TQ9H0L4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.222e-10■□□□□ 9.6
CSTF2TQ9H0L4 IDI1-204ENST00000482091 1029 ntTSL 513.16□□□□□ -0.32e-8■□□□□ 9.6
CSTF2TQ9H0L4 GRK6-209ENST00000512684 336 ntTSL 312□□□□□ -0.492e-6■□□□□ 9.6
CSTF2TQ9H0L4 PAPOLA-204ENST00000553461 892 ntTSL 27.12□□□□□ -1.272e-10■□□□□ 9.6
CSTF2TQ9H0L4 PAPOLA-215ENST00000555626 2272 ntTSL 1 (best)4.42□□□□□ -1.72e-10■□□□□ 9.6
CSTF2TQ9H0L4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.1□□□□□ -1.752e-10■□□□□ 9.6
CSTF2TQ9H0L4 SMYD3-217ENST00000493441 823 ntTSL 29.31□□□□□ -0.921e-6■□□□□ 9.6
CSTF2TQ9H0L4 SMYD3-202ENST00000366517 1372 ntTSL 1 (best)7.2□□□□□ -1.261e-6■□□□□ 9.6
CSTF2TQ9H0L4 PGGHG-205ENST00000474221 4418 ntTSL 213.53□□□□□ -0.248e-8■□□□□ 9.6
CSTF2TQ9H0L4 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.73□□□□□ -0.378e-8■□□□□ 9.6
CSTF2TQ9H0L4 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.568e-8■□□□□ 9.6
CSTF2TQ9H0L4 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC7.73□□□□□ -1.173e-12■□□□□ 9.6
CSTF2TQ9H0L4 BCR-208ENST00000466076 495 ntTSL 314.63□□□□□ -0.072e-9■□□□□ 9.6
CSTF2TQ9H0L4 LINC01004-202ENST00000450686 538 ntTSL 3 BASIC9.65□□□□□ -0.865e-15■□□□□ 9.6
CSTF2TQ9H0L4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.96□□□□□ -1.465e-15■□□□□ 9.6
CSTF2TQ9H0L4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.197e-7■□□□□ 9.5
CSTF2TQ9H0L4 APP-215ENST00000474136 1309 ntTSL 1 (best)19.23■□□□□ 0.673e-6■□□□□ 9.5
CSTF2TQ9H0L4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.01■□□□□ 0.317e-7■□□□□ 9.5
CSTF2TQ9H0L4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.297e-7■□□□□ 9.5
CSTF2TQ9H0L4 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.82■□□□□ 0.283e-6■□□□□ 9.5
CSTF2TQ9H0L4 RFFL-211ENST00000584541 563 ntTSL 416.82■□□□□ 0.287e-7■□□□□ 9.5
CSTF2TQ9H0L4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.21■□□□□ 0.193e-6■□□□□ 9.5
CSTF2TQ9H0L4 AC004223.3-202ENST00000591723 676 ntTSL 515.61■□□□□ 0.097e-7■□□□□ 9.5
CSTF2TQ9H0L4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.113e-6■□□□□ 9.5
CSTF2TQ9H0L4 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.15□□□□□ -0.143e-6■□□□□ 9.5
CSTF2TQ9H0L4 AC004223.3-203ENST00000592181 787 ntAPPRIS ALT2 TSL 514.13□□□□□ -0.157e-7■□□□□ 9.5
CSTF2TQ9H0L4 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.177e-7■□□□□ 9.5
CSTF2TQ9H0L4 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.82□□□□□ -0.23e-6■□□□□ 9.5
CSTF2TQ9H0L4 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.287e-7■□□□□ 9.5
CSTF2TQ9H0L4 CCDC92-204ENST00000539761 751 ntTSL 311.11□□□□□ -0.637e-7■□□□□ 9.5
CSTF2TQ9H0L4 APP-201ENST00000346798 3467 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.663e-6■□□□□ 9.5
CSTF2TQ9H0L4 RFFL-209ENST00000581265 596 ntTSL 410.05□□□□□ -0.87e-7■□□□□ 9.5
CSTF2TQ9H0L4 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC9.3□□□□□ -0.927e-7■□□□□ 9.5
CSTF2TQ9H0L4 ACAA1-210ENST00000451419 964 ntTSL 39.15□□□□□ -0.947e-7■□□□□ 9.5
CSTF2TQ9H0L4 APP-206ENST00000359726 3294 ntTSL 2 BASIC7.43□□□□□ -1.223e-6■□□□□ 9.5
CSTF2TQ9H0L4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.92■□□□□ 0.34e-10■□□□□ 9.5
CSTF2TQ9H0L4 OAZ1-206ENST00000589739 657 ntTSL 216.41■□□□□ 0.227e-16■□□□□ 9.5
CSTF2TQ9H0L4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.061e-8■□□□□ 9.5
CSTF2TQ9H0L4 MRPS30-201ENST00000230914 4331 ntTSL 55.02□□□□□ -1.611e-8■□□□□ 9.5
CSTF2TQ9H0L4 SPECC1L-201ENST00000314328 6756 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.611e-13■□□□□ 9.5
CSTF2TQ9H0L4 SPECC1L-204ENST00000437398 6674 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.621e-13■□□□□ 9.5
CSTF2TQ9H0L4 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.06□□□□□ -1.281e-13■□□□□ 9.5
CSTF2TQ9H0L4 TMEM63A-201ENST00000366835 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.783e-6■□□□□ 9.5
CSTF2TQ9H0L4 CSNK1E-211ENST00000451964 873 ntTSL 311.57□□□□□ -0.564e-8■□□□□ 9.5
CSTF2TQ9H0L4 ARID4B-208ENST00000466653 2315 ntTSL 215.85■□□□□ 0.131e-7■□□□□ 9.5
CSTF2TQ9H0L4 ARID4B-207ENST00000462969 273 ntTSL 213.73□□□□□ -0.211e-7■□□□□ 9.5
CSTF2TQ9H0L4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.91■□□□□ 0.782e-6■□□□□ 9.5
CSTF2TQ9H0L4 HNF4A-203ENST00000372920 3340 ntTSL 1 (best)16.91■□□□□ 0.32e-6■□□□□ 9.5
CSTF2TQ9H0L4 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.66□□□□□ -0.382e-6■□□□□ 9.5
CSTF2TQ9H0L4 HNF4A-201ENST00000316099 6445 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.772e-6■□□□□ 9.5
CSTF2TQ9H0L4 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.557e-12■□□□□ 9.5
CSTF2TQ9H0L4 PRR13-202ENST00000429243 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.597e-12■□□□□ 9.5
CSTF2TQ9H0L4 PRR13-208ENST00000549740 786 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.827e-12■□□□□ 9.5
CSTF2TQ9H0L4 PRR13-201ENST00000379786 927 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.887e-12■□□□□ 9.5
CSTF2TQ9H0L4 PRR13-210ENST00000551003 1009 ntAPPRIS ALT2 TSL 3 BASIC8.54□□□□□ -1.047e-12■□□□□ 9.5
CSTF2TQ9H0L4 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.17e-12■□□□□ 9.5
CSTF2TQ9H0L4 PRR13-206ENST00000549135 755 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.117e-12■□□□□ 9.5
CSTF2TQ9H0L4 PRR13-207ENST00000549581 838 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.157e-12■□□□□ 9.5
CSTF2TQ9H0L4 PRR13-203ENST00000546581 810 ntAPPRIS ALT2 TSL 3 BASIC7.47□□□□□ -1.217e-12■□□□□ 9.5
CSTF2TQ9H0L4 PRR13-204ENST00000547368 688 ntAPPRIS ALT2 TSL 3 BASIC6.78□□□□□ -1.327e-12■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-203ENST00000430811 860 ntTSL 224.02■■□□□ 1.441e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.94■□□□□ 0.461e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-213ENST00000526842 535 ntTSL 516.84■□□□□ 0.291e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.171e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.54■□□□□ 0.081e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-221ENST00000534372 544 ntTSL 59.84□□□□□ -0.831e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-219ENST00000531291 572 ntTSL 58.85□□□□□ -0.991e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-202ENST00000399614 594 ntTSL 46.79□□□□□ -1.321e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-216ENST00000528968 587 ntTSL 56.35□□□□□ -1.391e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-220ENST00000532325 526 ntTSL 56.01□□□□□ -1.451e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-217ENST00000529361 555 ntTSL 55.36□□□□□ -1.551e-9■□□□□ 9.5
CSTF2TQ9H0L4 NAP1L4-204ENST00000448187 888 ntTSL 54.96□□□□□ -1.621e-9■□□□□ 9.5
CSTF2TQ9H0L4 ABTB2-202ENST00000530814 566 ntTSL 415.46■□□□□ 0.078e-7■□□□□ 9.5
CSTF2TQ9H0L4 CCDC92-203ENST00000539551 860 ntTSL 314.23□□□□□ -0.138e-7■□□□□ 9.5
CSTF2TQ9H0L4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.188e-7■□□□□ 9.5
CSTF2TQ9H0L4 PPM1A-202ENST00000325658 4125 ntTSL 1 (best) BASIC10.24□□□□□ -0.778e-7■□□□□ 9.5
CSTF2TQ9H0L4 PPM1A-205ENST00000528241 564 ntTSL 58.64□□□□□ -1.038e-7■□□□□ 9.5
CSTF2TQ9H0L4 PPM1A-201ENST00000325642 1713 ntTSL 2 BASIC8.01□□□□□ -1.138e-7■□□□□ 9.5
CSTF2TQ9H0L4 PPM1A-206ENST00000531143 1546 ntTSL 1 (best)7.08□□□□□ -1.288e-7■□□□□ 9.5
CSTF2TQ9H0L4 PPM1A-208ENST00000532036 1561 ntTSL 57.01□□□□□ -1.298e-7■□□□□ 9.5
CSTF2TQ9H0L4 DGCR8-205ENST00000475941 2669 ntTSL 215.54■□□□□ 0.081e-6■□□□□ 9.5
CSTF2TQ9H0L4 DGCR8-206ENST00000485802 555 ntTSL 513.19□□□□□ -0.31e-6■□□□□ 9.5
CSTF2TQ9H0L4 DGCR8-209ENST00000495826 4695 ntTSL 1 (best)13.1□□□□□ -0.311e-6■□□□□ 9.5
CSTF2TQ9H0L4 DGCR8-210ENST00000498171 3661 ntTSL 1 (best)11.54□□□□□ -0.561e-6■□□□□ 9.5
CSTF2TQ9H0L4 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC11.09□□□□□ -0.631e-6■□□□□ 9.5
CSTF2TQ9H0L4 KMT2E-214ENST00000495267 1133 ntTSL 1 (best)18.78■□□□□ 0.63e-8■□□□□ 9.5
CSTF2TQ9H0L4 KMT2E-211ENST00000480368 679 ntTSL 518.74■□□□□ 0.593e-8■□□□□ 9.5
CSTF2TQ9H0L4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.249e-9■□□□□ 9.5
CSTF2TQ9H0L4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.46■□□□□ 0.233e-8■□□□□ 9.5
Retrieved 100 of 19,151 protein–RNA pairs in 221 ms