RNA–Protein interactions for RNA: ENST00000553461.1

PAPOLA-204, Transcript of poly(A) polymerase alpha, humanhuman

TSL 2

Gene PAPOLA, Length 892 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAPOLA-204ENST00000553461 AEBP2Q6ZN18 517 aaPredicted RBP29.53■■■□□ 2.32
PAPOLA-204ENST00000553461 CHIC1Q5VXU3 224 aa28.05■■■□□ 2.08
PAPOLA-204ENST00000553461 SENP3Q9H4L4 574 aaPredicted RBP25.16■■□□□ 1.62
PAPOLA-204ENST00000553461 PHF23Q9BUL5 403 aaPredicted RBP24.88■■□□□ 1.57
PAPOLA-204ENST00000553461 FOXD1Q16676 465 aa23.48■■□□□ 1.35
PAPOLA-204ENST00000553461 PLPPR3Q6T4P5 718 aa22.43■■□□□ 1.18
PAPOLA-204ENST00000553461 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
PAPOLA-204ENST00000553461 PIAS4Q8N2W9 510 aaPredicted RBP21.95■■□□□ 1.1
PAPOLA-204ENST00000553461 MSH5O43196 834 aa21.94■■□□□ 1.1
PAPOLA-204ENST00000553461 ADRA2BP18089 450 aa21.92■■□□□ 1.1
PAPOLA-204ENST00000553461 POTEDQ86YR6 584 aa21.6■■□□□ 1.05
PAPOLA-204ENST00000553461 MAPK8IP2Q13387 824 aaPredicted RBP20.15■□□□□ 0.82
PAPOLA-204ENST00000553461 SCAF1Q9H7N4 1312 aaKnown RBP20.03■□□□□ 0.8
PAPOLA-204ENST00000553461 DMRT2Q9Y5R5 561 aa19.96■□□□□ 0.79
PAPOLA-204ENST00000553461 PPP4R3CPQ6ZMV5 832 aa19.68■□□□□ 0.74
PAPOLA-204ENST00000553461 CNKSR2Q8WXI2 1034 aa19.29■□□□□ 0.68
PAPOLA-204ENST00000553461 HOXD11P31277 338 aaPredicted RBP19.23■□□□□ 0.67
PAPOLA-204ENST00000553461 DCAF8L1A6NGE4 600 aa19.2■□□□□ 0.66
PAPOLA-204ENST00000553461 RNF216Q9NWF9 866 aaPredicted RBP19.1■□□□□ 0.65
PAPOLA-204ENST00000553461 NCBP3Q53F19 620 aaKnown RBP18.92■□□□□ 0.62
PAPOLA-204ENST00000553461 CACNB1Q02641 598 aaPredicted RBP18.85■□□□□ 0.61
PAPOLA-204ENST00000553461 RNF39Q9H2S5 420 aa18.73■□□□□ 0.59
PAPOLA-204ENST00000553461 NPM3O75607 178 aaKnown RBP18.65■□□□□ 0.58
PAPOLA-204ENST00000553461 DNAJC5BQ9UF47 199 aa18.53■□□□□ 0.56
PAPOLA-204ENST00000553461 C1QBPQ07021 282 aaKnown RBP18.45■□□□□ 0.54
PAPOLA-204ENST00000553461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.532e-7■□□□□ 9.9
PAPOLA-204ENST00000553461 KCNA4P22459 653 aa18.33■□□□□ 0.52
PAPOLA-204ENST00000553461 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
PAPOLA-204ENST00000553461 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
PAPOLA-204ENST00000553461 SPINK5Q9NQ38 1064 aaPredicted RBP17.72■□□□□ 0.43
PAPOLA-204ENST00000553461 CAPN15O75808 1086 aa17.69■□□□□ 0.42
PAPOLA-204ENST00000553461 DSG3P32926 999 aa17.56■□□□□ 0.4
PAPOLA-204ENST00000553461 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.44■□□□□ 0.38
PAPOLA-204ENST00000553461 APLP2Q06481 763 aa17.44■□□□□ 0.38
PAPOLA-204ENST00000553461 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
PAPOLA-204ENST00000553461 TRHP20396 242 aaPredicted RBP17.42■□□□□ 0.38
PAPOLA-204ENST00000553461 SAMD1Q6SPF0 538 aaPredicted RBP17.35■□□□□ 0.37
PAPOLA-204ENST00000553461 ZNF219Q9P2Y4 722 aaPredicted RBP17.35■□□□□ 0.37
PAPOLA-204ENST00000553461 SLC4A1APQ9BWU0 796 aaKnown RBP17.31■□□□□ 0.36
PAPOLA-204ENST00000553461 ABCB7O75027 752 aa17.29■□□□□ 0.36
PAPOLA-204ENST00000553461 MYCNP04198 464 aaPredicted RBP17.24■□□□□ 0.35
PAPOLA-204ENST00000553461 FOXD4L1Q9NU39 408 aa17.08■□□□□ 0.32
PAPOLA-204ENST00000553461 POLA2Q14181 598 aa16.95■□□□□ 0.3
PAPOLA-204ENST00000553461 ATF5Q9Y2D1 282 aaPredicted RBP16.88■□□□□ 0.29
PAPOLA-204ENST00000553461 ZBTB22O15209 634 aa16.85■□□□□ 0.29
PAPOLA-204ENST00000553461 POTEHQ6S545 545 aa16.77■□□□□ 0.28
PAPOLA-204ENST00000553461 RBM42Q9BTD8 480 aaKnown RBP16.73■□□□□ 0.27
PAPOLA-204ENST00000553461 ZBTB12Q9Y330 459 aaPredicted RBP16.56■□□□□ 0.24
PAPOLA-204ENST00000553461 ATXN8OSP0DMR3 200 aa16.53■□□□□ 0.24
PAPOLA-204ENST00000553461 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
PAPOLA-204ENST00000553461 CHRDL2Q6WN34 429 aa16.37■□□□□ 0.21
PAPOLA-204ENST00000553461 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
PAPOLA-204ENST00000553461 REM2Q8IYK8 340 aaPredicted RBP16.22■□□□□ 0.19
PAPOLA-204ENST00000553461 FBLN2P98095 1184 aa16.19■□□□□ 0.18
PAPOLA-204ENST00000553461 CSRNP3Q8WYN3 585 aa16.1■□□□□ 0.17
PAPOLA-204ENST00000553461 MKRN4PQ13434 485 aaPredicted RBP16.08■□□□□ 0.16
PAPOLA-204ENST00000553461 SPDYE2BA6NHP3 402 aa16.06■□□□□ 0.16
PAPOLA-204ENST00000553461 SPDYE6P0CI01 402 aa16.06■□□□□ 0.16
PAPOLA-204ENST00000553461 SPDYE2Q495Y8 402 aa16.06■□□□□ 0.16
PAPOLA-204ENST00000553461 PITPNM1O00562 1244 aa16.05■□□□□ 0.16
PAPOLA-204ENST00000553461 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
PAPOLA-204ENST00000553461 EHMT2Q96KQ7 1210 aa15.94■□□□□ 0.14
PAPOLA-204ENST00000553461 ZNF692Q9BU19 519 aaPredicted RBP15.91■□□□□ 0.14
PAPOLA-204ENST00000553461 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
PAPOLA-204ENST00000553461 SSUH2Q9Y2M2 353 aa15.84■□□□□ 0.13
PAPOLA-204ENST00000553461 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
PAPOLA-204ENST00000553461 SPDYE1Q8NFV5 336 aaPredicted RBP15.78■□□□□ 0.12
PAPOLA-204ENST00000553461 HAX1O00165 279 aa15.72■□□□□ 0.11
PAPOLA-204ENST00000553461 SP7Q8TDD2 431 aaPredicted RBP15.72■□□□□ 0.11
PAPOLA-204ENST00000553461 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
PAPOLA-204ENST00000553461 PRKAR2AP13861 404 aaKnown RBP15.65■□□□□ 0.1
PAPOLA-204ENST00000553461 PRR29P0C7W0 189 aa15.53■□□□□ 0.08
PAPOLA-204ENST00000553461 EVX2Q03828 476 aa15.53■□□□□ 0.08
PAPOLA-204ENST00000553461 CHADLQ6NUI6 762 aa15.5■□□□□ 0.07
PAPOLA-204ENST00000553461 C19orf67A6NJJ6 358 aa15.38■□□□□ 0.05
PAPOLA-204ENST00000553461 SPDYE4A6NLX3 237 aa15.35■□□□□ 0.05
PAPOLA-204ENST00000553461 FARP1Q9Y4F1 1045 aaPredicted RBP15.25■□□□□ 0.03
PAPOLA-204ENST00000553461 STAG3Q9UJ98 1225 aa15.23■□□□□ 0.03
PAPOLA-204ENST00000553461 GABBR2O75899 941 aa15.17■□□□□ 0.02
PAPOLA-204ENST00000553461 CD44P16070 742 aaKnown RBP15.15■□□□□ 0.02
PAPOLA-204ENST00000553461 CREBZFQ9NS37 354 aa15.14■□□□□ 0.01
PAPOLA-204ENST00000553461 ZRANB1Q9UGI0 708 aa14.95□□□□□ -0.02
PAPOLA-204ENST00000553461 PROM2Q8N271 834 aa14.93□□□□□ -0.02
PAPOLA-204ENST00000553461 CLCN6P51797 869 aa14.89□□□□□ -0.03
PAPOLA-204ENST00000553461 ZNF579Q8NAF0 562 aaKnown RBP14.89□□□□□ -0.03
PAPOLA-204ENST00000553461 MNX1P50219 401 aaPredicted RBP14.87□□□□□ -0.03
PAPOLA-204ENST00000553461 NPM1P06748 294 aaKnown RBP eCLIP14.86□□□□□ -0.03
PAPOLA-204ENST00000553461 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
PAPOLA-204ENST00000553461 PAK3O75914 559 aaPredicted RBP14.82□□□□□ -0.04
PAPOLA-204ENST00000553461 DCBLD2Q96PD2 775 aa14.78□□□□□ -0.04
PAPOLA-204ENST00000553461 LHX8Q68G74 356 aa14.77□□□□□ -0.05
PAPOLA-204ENST00000553461 PHF12Q96QT6 1004 aa14.74□□□□□ -0.05
PAPOLA-204ENST00000553461 GALR2O43603 387 aaPredicted RBP14.73□□□□□ -0.05
PAPOLA-204ENST00000553461 MIER1Q8N108 512 aa14.66□□□□□ -0.06
PAPOLA-204ENST00000553461 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
PAPOLA-204ENST00000553461 FKBP8Q14318 412 aa14.62□□□□□ -0.07
PAPOLA-204ENST00000553461 TSPYL2Q9H2G4 693 aaPredicted RBP14.62□□□□□ -0.07
PAPOLA-204ENST00000553461 PLCD3Q8N3E9 789 aa14.54□□□□□ -0.08
PAPOLA-204ENST00000553461 MS4A3Q96HJ5 214 aa14.53□□□□□ -0.08
PAPOLA-204ENST00000553461 CCDC61Q9Y6R9 512 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms