Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
S1PR3Q99500 ME2P1-201ENST00000426028 1970 ntBASIC13.69□□□□□ -0.22
S1PR3Q99500 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.69□□□□□ -0.22
S1PR3Q99500 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
S1PR3Q99500 AL391005.1-201ENST00000623953 2435 ntBASIC13.69□□□□□ -0.22
S1PR3Q99500 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
S1PR3Q99500 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
S1PR3Q99500 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
S1PR3Q99500 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.68□□□□□ -0.22
S1PR3Q99500 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.68□□□□□ -0.22
S1PR3Q99500 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.68□□□□□ -0.22
S1PR3Q99500 AC087641.1-201ENST00000557561 1021 ntBASIC13.68□□□□□ -0.22
S1PR3Q99500 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.68□□□□□ -0.22
S1PR3Q99500 AL356488.2-201ENST00000602755 427 ntBASIC13.68□□□□□ -0.22
S1PR3Q99500 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 AC008667.4-201ENST00000607370 168 ntBASIC13.68□□□□□ -0.22
S1PR3Q99500 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.68□□□□□ -0.22
S1PR3Q99500 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
S1PR3Q99500 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
S1PR3Q99500 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
S1PR3Q99500 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
S1PR3Q99500 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 KRT8P39-201ENST00000396270 1433 ntBASIC13.67□□□□□ -0.22
S1PR3Q99500 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.67□□□□□ -0.22
S1PR3Q99500 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
S1PR3Q99500 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.67□□□□□ -0.22
S1PR3Q99500 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 AC073621.1-201ENST00000392730 636 ntBASIC13.67□□□□□ -0.22
S1PR3Q99500 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.67□□□□□ -0.22
S1PR3Q99500 HCG4-201ENST00000418983 998 ntBASIC13.67□□□□□ -0.22
S1PR3Q99500 AC026396.1-201ENST00000419388 421 ntBASIC13.67□□□□□ -0.22
S1PR3Q99500 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.67□□□□□ -0.22
S1PR3Q99500 SLC25A6P2-201ENST00000497974 877 ntBASIC13.67□□□□□ -0.22
S1PR3Q99500 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.67□□□□□ -0.22
S1PR3Q99500 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.67□□□□□ -0.22
S1PR3Q99500 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.67□□□□□ -0.22
S1PR3Q99500 AC012640.2-201ENST00000561606 901 ntBASIC13.67□□□□□ -0.22
S1PR3Q99500 MIR4492-201ENST00000581627 80 ntBASIC13.67□□□□□ -0.22
S1PR3Q99500 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.67□□□□□ -0.22
S1PR3Q99500 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.67□□□□□ -0.22
S1PR3Q99500 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.67□□□□□ -0.22
S1PR3Q99500 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.67□□□□□ -0.22
S1PR3Q99500 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
S1PR3Q99500 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.67□□□□□ -0.22
S1PR3Q99500 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms