Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 LIN28AP1-201ENST00000429574 405 ntBASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 AC010203.1-204ENST00000548782 407 ntBASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.14■□□□□ 0.01
CNIH3Q8TBE1 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 AC243591.1-201ENST00000452967 1364 ntBASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 PCGF3-213ENST00000620529 1899 ntBASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 AC004817.3-201ENST00000602957 2129 ntBASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH3Q8TBE1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH3Q8TBE1 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms