Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC12.83□□□□□ -0.35
SHISA2Q6UWI4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SHISA2Q6UWI4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SHISA2Q6UWI4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SHISA2Q6UWI4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SHISA2Q6UWI4 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
SHISA2Q6UWI4 SLC7A15P-201ENST00000424028 1363 ntBASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 KRT223P-202ENST00000449164 1292 ntBASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 CHCHD2P3-201ENST00000603038 451 ntBASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 AL512343.1-201ENST00000605837 169 ntBASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 COX11-210ENST00000639671 696 ntBASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SHISA2Q6UWI4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 AL021920.2-201ENST00000624828 1351 ntBASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 RN7SL837P-201ENST00000463010 287 ntBASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 AC098859.1-201ENST00000502915 1238 ntBASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 WASH4P-201ENST00000564273 1246 ntBASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 AL033527.4-201ENST00000641026 673 ntBASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SHISA2Q6UWI4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms