Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 BCRP1-201ENST00000444246 691 ntBASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 IGHV3-42-201ENST00000520410 361 ntBASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 AL096865.1-201ENST00000606796 927 ntBASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 AC007967.4-201ENST00000614700 386 ntBASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 AC011676.5-201ENST00000624864 2660 ntBASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 AD000864.1-201ENST00000624076 2295 ntBASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SWSAP1Q6NVH7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 AGGF1P2-201ENST00000426656 2106 ntBASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SWSAP1Q6NVH7 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 FAM8A3P-201ENST00000427218 844 ntBASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 AL353705.2-201ENST00000428243 662 ntBASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 AC092580.3-201ENST00000430932 139 ntBASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 RNA5SP421-201ENST00000516864 134 ntBASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 AC092364.2-202ENST00000597012 1073 ntBASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 AL158211.3-201ENST00000607385 239 ntBASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 AL390754.1-201ENST00000619088 582 ntBASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SWSAP1Q6NVH7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms