Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 CETN4P-206ENST00000642099 2168 ntBASIC17.43■□□□□ 0.38
VARS2Q5ST30 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
VARS2Q5ST30 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
VARS2Q5ST30 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 AL133215.2-201ENST00000609242 977 ntBASIC17.42■□□□□ 0.38
VARS2Q5ST30 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VARS2Q5ST30 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VARS2Q5ST30 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 RPL37AP1-201ENST00000412502 279 ntBASIC17.41■□□□□ 0.38
VARS2Q5ST30 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 TEX28P1-201ENST00000613479 1221 ntBASIC17.41■□□□□ 0.38
VARS2Q5ST30 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 TEX28P2-201ENST00000617764 1221 ntBASIC17.41■□□□□ 0.38
VARS2Q5ST30 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.41■□□□□ 0.38
VARS2Q5ST30 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VARS2Q5ST30 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 AC022144.1-201ENST00000602255 1580 ntBASIC17.4■□□□□ 0.38
VARS2Q5ST30 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 RNF216P1-203ENST00000404404 2427 ntBASIC17.4■□□□□ 0.38
VARS2Q5ST30 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 AC012313.1-201ENST00000593393 3059 ntBASIC17.4■□□□□ 0.38
VARS2Q5ST30 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VARS2Q5ST30 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VARS2Q5ST30 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms