Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CDKL1Q00532 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDKL1Q00532 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CDKL1Q00532 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDKL1Q00532 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKL1Q00532 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
CDKL1Q00532 GGT4P-201ENST00000623672 1708 ntBASIC16.29■□□□□ 0.2
CDKL1Q00532 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKL1Q00532 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.29■□□□□ 0.2
CDKL1Q00532 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.29■□□□□ 0.2
CDKL1Q00532 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKL1Q00532 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKL1Q00532 CXCL1P1-201ENST00000502804 216 ntBASIC16.29■□□□□ 0.2
CDKL1Q00532 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.29■□□□□ 0.2
CDKL1Q00532 UNC93B6-202ENST00000528242 690 ntBASIC16.29■□□□□ 0.2
CDKL1Q00532 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKL1Q00532 MIR4515-201ENST00000584082 81 ntBASIC16.29■□□□□ 0.2
CDKL1Q00532 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.29■□□□□ 0.2
CDKL1Q00532 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKL1Q00532 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDKL1Q00532 AL031731.1-201ENST00000642131 2094 ntBASIC16.29■□□□□ 0.2
CDKL1Q00532 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKL1Q00532 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.29■□□□□ 0.2
CDKL1Q00532 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CDKL1Q00532 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDKL1Q00532 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CDKL1Q00532 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.29■□□□□ 0.2
CDKL1Q00532 AC012569.1-201ENST00000591191 1524 ntBASIC16.29■□□□□ 0.2
CDKL1Q00532 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CDKL1Q00532 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.28■□□□□ 0.2
CDKL1Q00532 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
CDKL1Q00532 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDKL1Q00532 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKL1Q00532 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDKL1Q00532 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
CDKL1Q00532 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CDKL1Q00532 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKL1Q00532 AC009947.1-201ENST00000444350 727 ntBASIC16.28■□□□□ 0.2
CDKL1Q00532 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CDKL1Q00532 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKL1Q00532 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKL1Q00532 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKL1Q00532 MIR4751-201ENST00000578027 74 ntBASIC16.28■□□□□ 0.2
CDKL1Q00532 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.28■□□□□ 0.2
CDKL1Q00532 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKL1Q00532 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.28■□□□□ 0.2
CDKL1Q00532 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.28■□□□□ 0.2
CDKL1Q00532 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
CDKL1Q00532 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CDKL1Q00532 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDKL1Q00532 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDKL1Q00532 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDKL1Q00532 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms