Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 SRSF4-202ENST00000466448 1264 ntAPPRIS ALT2 TSL 316.91■□□□□ 0.39e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-223ENST00000568266 1294 ntTSL 515.82■□□□□ 0.129e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-226ENST00000570284 701 ntTSL 514.58□□□□□ -0.089e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-214ENST00000564284 603 ntTSL 214.39□□□□□ -0.119e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.119e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-211ENST00000563314 4574 ntTSL 514.24□□□□□ -0.139e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-218ENST00000565971 3264 ntTSL 1 (best)13.71□□□□□ -0.219e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.229e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.349e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.379e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.49e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.449e-8■□□□□ 8.4
NCBP2P52298 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.549e-8■□□□□ 8.4
NCBP2P52298 GLS-213ENST00000479552 2016 ntTSL 1 (best)23.52■■□□□ 1.366e-18■□□□□ 8.4
NCBP2P52298 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.656e-18■□□□□ 8.4
NCBP2P52298 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.546e-18■□□□□ 8.4
NCBP2P52298 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.423e-12■□□□□ 8.4
NCBP2P52298 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.18□□□□□ -1.263e-12■□□□□ 8.4
NCBP2P52298 AC068152.1-211ENST00000571665 255 ntTSL 427.39■■□□□ 1.986e-9■□□□□ 8.4
NCBP2P52298 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.919e-6■□□□□ 8.4
NCBP2P52298 GATAD2A-209ENST00000448576 271 ntTSL 325.77■■□□□ 1.729e-6■□□□□ 8.4
NCBP2P52298 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.74■■□□□ 1.716e-9■□□□□ 8.4
NCBP2P52298 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.677e-13■□□□□ 8.4
NCBP2P52298 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.16■■□□□ 1.626e-9■□□□□ 8.4
NCBP2P52298 TCF3-210ENST00000587235 986 ntTSL 523.05■■□□□ 1.289e-6■□□□□ 8.4
NCBP2P52298 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.83■■□□□ 1.089e-6■□□□□ 8.4
NCBP2P52298 CAPRIN1-203ENST00000526477 587 ntTSL 221.74■■□□□ 1.079e-6■□□□□ 8.4
NCBP2P52298 CAPRIN1-205ENST00000528856 595 ntTSL 521.74■■□□□ 1.079e-6■□□□□ 8.4
NCBP2P52298 FBXO41-203ENST00000520186 817 ntTSL 321.45■■□□□ 1.029e-6■□□□□ 8.4
NCBP2P52298 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.029e-6■□□□□ 8.4
NCBP2P52298 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.57■□□□□ 0.889e-6■□□□□ 8.4
NCBP2P52298 DVL2-210ENST00000575756 1136 ntTSL 520.29■□□□□ 0.849e-6■□□□□ 8.4
NCBP2P52298 GATAD2A-210ENST00000457895 729 ntTSL 220.13■□□□□ 0.819e-6■□□□□ 8.4
NCBP2P52298 MACF1-211ENST00000467673 792 ntTSL 319.73■□□□□ 0.759e-6■□□□□ 8.4
NCBP2P52298 ST20-MTHFS-202ENST00000494999 632 ntTSL 319.73■□□□□ 0.759e-6■□□□□ 8.4
NCBP2P52298 SH3YL1-221ENST00000477707 581 ntTSL 419.63■□□□□ 0.739e-6■□□□□ 8.4
NCBP2P52298 GPI-208ENST00000588991 2021 ntTSL 219.48■□□□□ 0.719e-6■□□□□ 8.4
NCBP2P52298 PHF1-209ENST00000487667 1930 ntTSL 519.27■□□□□ 0.679e-6■□□□□ 8.4
NCBP2P52298 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.649e-6■□□□□ 8.4
NCBP2P52298 C11orf49-215ENST00000528488 1623 ntTSL 218.98■□□□□ 0.639e-6■□□□□ 8.4
NCBP2P52298 GATAD2A-212ENST00000494516 640 ntTSL 218.56■□□□□ 0.569e-6■□□□□ 8.4
NCBP2P52298 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.549e-6■□□□□ 8.4
NCBP2P52298 GATAD2A-204ENST00000417582 655 ntTSL 218.26■□□□□ 0.519e-6■□□□□ 8.4
NCBP2P52298 GATAD2A-213ENST00000609040 1652 ntTSL 218.14■□□□□ 0.499e-6■□□□□ 8.4
NCBP2P52298 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.459e-6■□□□□ 8.4
NCBP2P52298 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.69■□□□□ 0.429e-6■□□□□ 8.4
NCBP2P52298 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.419e-6■□□□□ 8.4
NCBP2P52298 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.369e-6■□□□□ 8.4
NCBP2P52298 DVL2-203ENST00000572285 1240 ntTSL 1 (best)17.24■□□□□ 0.359e-6■□□□□ 8.4
NCBP2P52298 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.23■□□□□ 0.359e-6■□□□□ 8.4
NCBP2P52298 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.319e-6■□□□□ 8.4
NCBP2P52298 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.39e-6■□□□□ 8.4
NCBP2P52298 MACF1-227ENST00000524432 4338 ntTSL 516.9■□□□□ 0.39e-6■□□□□ 8.4
NCBP2P52298 C11orf49-207ENST00000525895 1527 ntTSL 216.9■□□□□ 0.39e-6■□□□□ 8.4
NCBP2P52298 ZNF142-206ENST00000450560 373 ntTSL 316.89■□□□□ 0.299e-6■□□□□ 8.4
NCBP2P52298 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.279e-6■□□□□ 8.4
NCBP2P52298 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.32■□□□□ 0.29e-6■□□□□ 8.4
NCBP2P52298 AHI1-214ENST00000531527 516 ntTSL 316.11■□□□□ 0.179e-6■□□□□ 8.4
NCBP2P52298 STX12-202ENST00000440806 718 ntTSL 315.96■□□□□ 0.159e-6■□□□□ 8.4
NCBP2P52298 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.146e-9■□□□□ 8.4
NCBP2P52298 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.19e-6■□□□□ 8.4
NCBP2P52298 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.63■□□□□ 0.099e-6■□□□□ 8.4
NCBP2P52298 CAPRIN1-216ENST00000534042 574 ntTSL 515.2■□□□□ 0.029e-6■□□□□ 8.4
NCBP2P52298 AHI1-210ENST00000524469 1074 ntTSL 515.07■□□□□ 09e-6■□□□□ 8.4
NCBP2P52298 SH3YL1-224ENST00000488044 672 ntTSL 414.78□□□□□ -0.049e-6■□□□□ 8.4
NCBP2P52298 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.71□□□□□ -0.056e-9■□□□□ 8.4
NCBP2P52298 STC2-203ENST00000519511 582 ntTSL 214.62□□□□□ -0.076e-9■□□□□ 8.4
NCBP2P52298 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.089e-6■□□□□ 8.4
NCBP2P52298 MTHFS-204ENST00000560919 470 ntTSL 214.54□□□□□ -0.089e-6■□□□□ 8.4
NCBP2P52298 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.52□□□□□ -0.089e-6■□□□□ 8.4
NCBP2P52298 PHF1-203ENST00000427004 609 ntTSL 414.32□□□□□ -0.129e-6■□□□□ 8.4
NCBP2P52298 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.266e-9■□□□□ 8.4
NCBP2P52298 C11orf49-214ENST00000527784 1069 ntTSL 213.36□□□□□ -0.279e-6■□□□□ 8.4
NCBP2P52298 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC13.19□□□□□ -0.39e-6■□□□□ 8.4
NCBP2P52298 DEK-204ENST00000505224 1372 ntTSL 213.18□□□□□ -0.36e-9■□□□□ 8.4
NCBP2P52298 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.39e-6■□□□□ 8.4
NCBP2P52298 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC12.67□□□□□ -0.389e-6■□□□□ 8.4
NCBP2P52298 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.49e-6■□□□□ 8.4
NCBP2P52298 DEK-203ENST00000503715 580 ntTSL 512.23□□□□□ -0.456e-9■□□□□ 8.4
NCBP2P52298 PHF1-205ENST00000428274 836 ntTSL 512□□□□□ -0.499e-6■□□□□ 8.4
NCBP2P52298 PHF1-206ENST00000459809 461 ntTSL 411.94□□□□□ -0.59e-6■□□□□ 8.4
NCBP2P52298 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC11.86□□□□□ -0.519e-6■□□□□ 8.4
NCBP2P52298 C11orf49-220ENST00000533124 559 ntTSL 411.82□□□□□ -0.529e-6■□□□□ 8.4
NCBP2P52298 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.559e-6■□□□□ 8.4
NCBP2P52298 CAPRIN1-202ENST00000389645 3498 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.589e-6■□□□□ 8.4
NCBP2P52298 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC11.42□□□□□ -0.589e-6■□□□□ 8.4
NCBP2P52298 SH3YL1-220ENST00000475027 599 ntTSL 511.42□□□□□ -0.589e-6■□□□□ 8.4
NCBP2P52298 MGMT-203ENST00000482547 959 ntTSL 211.42□□□□□ -0.589e-6■□□□□ 8.4
NCBP2P52298 AHI1-215ENST00000531788 3655 ntTSL 211.2□□□□□ -0.629e-6■□□□□ 8.4
NCBP2P52298 ZNF142-203ENST00000433921 5800 ntTSL 211.19□□□□□ -0.629e-6■□□□□ 8.4
NCBP2P52298 CASC19-272ENST00000641991 1360 nt10.88□□□□□ -0.679e-6■□□□□ 8.4
NCBP2P52298 SH3YL1-210ENST00000454318 581 ntTSL 310.81□□□□□ -0.689e-6■□□□□ 8.4
NCBP2P52298 ANKZF1-219ENST00000483188 529 ntTSL 210.67□□□□□ -0.79e-6■□□□□ 8.4
NCBP2P52298 MRPS15-202ENST00000462067 1612 ntTSL 210.18□□□□□ -0.789e-6■□□□□ 8.4
NCBP2P52298 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC10.14□□□□□ -0.799e-6■□□□□ 8.4
NCBP2P52298 CAPRIN1-201ENST00000341394 4108 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.829e-6■□□□□ 8.4
NCBP2P52298 C11orf49-202ENST00000378615 1651 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.859e-6■□□□□ 8.4
NCBP2P52298 AHI1-202ENST00000327035 3638 ntTSL 1 (best) BASIC9.7□□□□□ -0.869e-6■□□□□ 8.4
NCBP2P52298 CASC19-247ENST00000641642 1107 nt9.66□□□□□ -0.869e-6■□□□□ 8.4
NCBP2P52298 C11orf49-209ENST00000526424 556 ntTSL 49.53□□□□□ -0.889e-6■□□□□ 8.4
Retrieved 100 of 18,329 protein–RNA pairs in 68.2 ms